RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NFIBO00712 420 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 FTLP02792 175 aaPredicted RBP21.18■□□□□ 0.98
COL13A1-201ENST00000354547 ZNF131P52739 623 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 MAPK7Q13164 816 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 RASGEF1CQ8N431 466 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 ALG3Q92685 438 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 COL20A1Q9P218 1284 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 SEL1LQ9UBV2 794 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 INTUQ9ULD6 942 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 ATRNL1Q5VV63 1379 aa21.18■□□□□ 0.98
COL13A1-201ENST00000354547 NPM3O75607 178 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 PPP1R37O75864 691 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 MDH1P40925 334 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 ITGB3BPQ13352 177 aaPredicted RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 TADA2BQ86TJ2 420 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 CD302Q8IX05 232 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 EFCAB13Q8IY85 973 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 EHMT1Q9H9B1 1298 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 ZNF70Q9UC06 446 aaPredicted RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 NOVA2Q9UNW9 492 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 SPDYE2BA6NHP3 402 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 DCDC2CA8MYV0 355 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 HMGB1P1B2RPK0 211 aaPredicted RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 MYO1FO00160 1098 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 DDX3YO15523 660 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 SPDYE6P0CI01 402 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 MARCKSL1P49006 195 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 FKBP1AP62942 108 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 AGPAT1Q99943 283 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 RANBP17Q9H2T7 1088 aaKnown RBP21.17■□□□□ 0.98
COL13A1-201ENST00000354547 ODF2LQ9ULJ1 636 aa21.17■□□□□ 0.98
COL13A1-201ENST00000354547 SMIM23A6NLE4 172 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 KRT71Q3SY84 523 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 MXRA8Q9BRK3 442 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 VCPKMTQ9H867 229 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 ANXA13P27216 316 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 IFFO1Q0D2I5 559 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 MESDQ14696 234 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 RPUSD2Q8IZ73 545 aaKnown RBP21.16■□□□□ 0.98
COL13A1-201ENST00000354547 KRT35Q92764 455 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 CCDC127Q96BQ5 260 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 ALG6Q9Y672 507 aa21.16■□□□□ 0.98
COL13A1-201ENST00000354547 H0YGN5 161 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 INPP5BP32019 993 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 VAMP7P51809 220 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 PPATQ06203 517 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 SF3A3Q12874 501 aaKnown RBP eCLIP21.15■□□□□ 0.98
COL13A1-201ENST00000354547 UHMK1Q8TAS1 419 aaKnown RBP21.15■□□□□ 0.98
COL13A1-201ENST00000354547 BTBD6Q96KE9 485 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 EPN3Q9H201 632 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 SLITRK6Q9H5Y7 841 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 SNX24Q9Y343 169 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 NFS1Q9Y697 457 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 ZHX2Q9Y6X8 837 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 SLC16A4O15374 487 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 CCDC172P0C7W6 258 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 BCRP11274 1271 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 ALAS1P13196 640 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 PLTPP55058 493 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 NPEPPSP55786 919 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 DR1Q01658 176 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 PPP2R5AQ15172 486 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 PTGISQ16647 500 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 CPNE8Q86YQ8 564 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 LARSQ9P2J5 1176 aaKnown RBP21.15■□□□□ 0.98
COL13A1-201ENST00000354547 A0A087WUV0 522 aaPredicted RBP21.15■□□□□ 0.98
COL13A1-201ENST00000354547 TRAF1Q13077 416 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 RNF187Q5TA31 235 aaPredicted RBP21.15■□□□□ 0.98
COL13A1-201ENST00000354547 TMC3Q7Z5M5 1100 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 PPM1KQ8N3J5 372 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 OGFOD1Q8N543 542 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 CCT8L2Q96SF2 557 aa21.15■□□□□ 0.98
COL13A1-201ENST00000354547 ANKRD62A6NC57 917 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 ERLIN2O94905 339 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 MYCLP12524 364 aaPredicted RBP21.14■□□□□ 0.98
COL13A1-201ENST00000354547 PEX3P56589 373 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 LMO3Q8TAP4 145 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 SYT11Q9BT88 431 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.98
COL13A1-201ENST00000354547 SGPL1O95470 568 aa21.14■□□□□ 0.97
COL13A1-201ENST00000354547 EIF2AK2P19525 551 aaKnown RBP21.14■□□□□ 0.97
COL13A1-201ENST00000354547 GUCY2CP25092 1073 aa21.14■□□□□ 0.97
COL13A1-201ENST00000354547 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
COL13A1-201ENST00000354547 ZNF473Q8WTR7 871 aaKnown RBP21.14■□□□□ 0.97
COL13A1-201ENST00000354547 C18orf8Q96DM3 657 aa21.14■□□□□ 0.97
COL13A1-201ENST00000354547 FAM84AQ96KN4 292 aa21.14■□□□□ 0.97
COL13A1-201ENST00000354547 POP1Q99575 1024 aaKnown RBP21.14■□□□□ 0.97
COL13A1-201ENST00000354547 NCANO14594 1321 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 TLDC2A0PJX2 215 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 MAGOHP61326 146 aaKnown RBP21.13■□□□□ 0.97
COL13A1-201ENST00000354547 SLC20A2Q08357 652 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 NLRP14Q86W24 1093 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 MAGOHBQ96A72 148 aaKnown RBP21.13■□□□□ 0.97
COL13A1-201ENST00000354547 SAAL1Q96ER3 474 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 FMO2Q99518 471 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 DAAM1Q9Y4D1 1078 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 KIAA0754O94854 1291 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 CALCAP01258 141 aa21.13■□□□□ 0.97
COL13A1-201ENST00000354547 SETQ01105 290 aaPredicted RBP21.13■□□□□ 0.97
COL13A1-201ENST00000354547 CETN1Q12798 172 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms