RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SEMA3GQ9NS98 782 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 ATP23Q9Y6H3 246 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 PRAMEF22A3QJZ6 481 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GSTA4O15217 222 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PAPLNO95428 1278 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PRLP01236 227 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 FTLP02792 175 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CYP7A1P22680 504 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RRM1P23921 792 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 AKAP5P24588 427 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 STT3AP46977 705 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TUBP50607 506 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SLC6A3Q01959 620 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PPARAQ07869 468 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ARHGAP44Q17R89 818 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C3orf38Q5JPI3 329 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PRAMEF18Q5VWM3 479 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MBNL2Q5VZF2 373 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 BTBD8Q5XKL5 378 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 STEAP3Q658P3 488 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 FAM180BQ6P0A1 224 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C22orf34Q6ZV56 151 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ZAR1Q86SH2 424 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SMAP1Q8IYB5 467 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 Q8N1Y9 231 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C7orf31Q8N865 590 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RNF152Q8N8N0 203 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 UHMK1Q8TAS1 419 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DEPTORQ8TB45 409 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MPP4Q96JB8 637 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TUBGCP5Q96RT8 1024 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DMRTA2Q96SC8 542 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PAGR1Q9BTK6 254 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 INO80BQ9C086 356 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MTG2Q9H4K7 406 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SLC6A20Q9NP91 592 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 IFT80Q9P2H3 777 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CPA4Q9UI42 421 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PCDHA6Q9UN73 950 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GTF2A1LQ9UNN4 478 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PCDHA3Q9Y5H8 950 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ADCY6O43306 1168 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DGKIO75912 1065 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TNFRSF6BO95407 300 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PRNPP04156 253 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 POLBP06746 335 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CKMT1AP12532 417 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 JUPP14923 745 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 NAT1P18440 290 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CTSSP25774 331 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CD40P25942 277 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TRHRP34981 398 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PHKA1P46020 1223 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 TIGD6Q17RP2 521 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 UVSSAQ2YD98 709 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CCDC38Q502W7 563 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ALFQ53S48 1182 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RRAGBQ5VZM2 374 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DARS2Q6PI48 645 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 OGFOD3Q6PK18 319 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MAEAQ7L5Y9 396 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 DAAM2Q86T65 1068 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GLB1L3Q8NCI6 653 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C1GALT1C1Q96EU7 318 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SENP7Q9BQF6 1050 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C19orf44Q9H6X5 657 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 C7orf69Q9H7B7 122 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 BTBD7Q9P203 1132 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PRSS50Q9UI38 385 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CAPN8A6NHC0 703 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 GOLIM4O00461 696 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 NFIBO00712 420 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 N4BP3O15049 544 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 FOXP2O15409 715 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SGSM2O43147 1006 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF500O60304 480 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 EIF4EBP3O60516 100 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SNX2O60749 519 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RNASEH2AO75792 299 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CD4P01730 458 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 PFKMP08237 780 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 U2AF1L5P0DN76 240 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 HOXA10P31260 410 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ERVFC1P60507 584 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 FAM193AP78312 1265 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 U2AF1Q01081 240 aaKnown RBP eCLIP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MVKQ03426 396 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF543Q08ER8 600 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ADRM1Q16186 407 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 KRBA2Q6ZNG9 492 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SRGAP1Q7Z6B7 1085 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 RHOT1Q8IXI2 618 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 OR1N1Q8NGS0 311 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SLC35A4Q96G79 324 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 CDC5LQ99459 802 aaKnown RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 SELENOOQ9BVL4 669 aa1.99□□□□□ -2.09
BRCA1-202ENST00000354071 ACE2Q9BYF1 805 aaPredicted RBP1.99□□□□□ -2.09
BRCA1-202ENST00000354071 MYLK2Q9H1R3 596 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms