RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CBWD5Q5RIA9 395 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 TCERG1LQ5VWI1 586 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 PAPD7Q5XG87 772 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 IQCEQ6IPM2 695 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SLC39A4Q6P5W5 647 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC62Q6P9F0 684 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 KCNV1Q6PIU1 500 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 METTL7BQ6UX53 244 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SEPT14Q6ZU15 432 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 CYFIP1Q7L576 1253 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 MTERF4Q7Z6M4 381 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 XXYLT1Q8NBI6 393 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 OLIG1Q8TAK6 271 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 PLEKHO2Q8TD55 490 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 TMC2Q8TDI7 906 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SLC10A4Q96EP9 437 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 MS4A4AQ96JQ5 239 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 MAP7D2Q96T17 732 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 MMP19Q99542 508 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 CARD6Q9BX69 1037 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 IFIH1Q9BYX4 1025 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ZNF302Q9NR11 478 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 HSPBP1Q9NZL4 362 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 SEPT9Q9UHD8 586 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 DDX41Q9UJV9 622 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 GUCA1BQ9UMX6 200 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 TFR2Q9UP52 801 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 BZW2Q9Y6E2 419 aaKnown RBP7.55□□□□□ -1.2
TRIM55-203ENST00000350034 STYXL1Q9Y6J8 313 aa7.55□□□□□ -1.2
TRIM55-203ENST00000350034 ADGRA3Q8IWK6 1321 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 ANO9A1A5B4 782 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 DENND3A2RUS2 1198 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 CCDC169A6NNP5 214 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 BTNL10A8MVZ5 291 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 GFPT2O94808 682 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 ARIH2O95376 493 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 ADRB2P07550 413 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 POTEJP0CG39 1038 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 TRIM49P0CI25 452 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 TRIM49CP0CI26 452 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 CETPP11597 493 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KRT13P13646 458 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 GARTP22102 1010 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 RFX1P22670 979 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 CNGA1P29973 690 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 RFC5P40937 340 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MAGEA1P43355 309 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 SOX10P56693 466 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 ERVK-9P63128 1117 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 RBM10P98175 930 aaKnown RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MYL7Q01449 175 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 SP4Q02446 784 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 PPP3CAQ08209 521 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KLHL30Q0D2K2 578 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KIF5AQ12840 1032 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 RAPGEF1Q13905 1077 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KCTD2Q14681 263 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 EMC2Q15006 297 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 WHAMMP3Q1A5X7 153 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 EPC2Q52LR7 807 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 BRDTQ58F21 947 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 CELF3Q5SZQ8 465 aaKnown RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 TRAPPC11Q7Z392 1133 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 ANKRD23Q86SG2 305 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 TXLNBQ8N3L3 684 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 RNF10Q8N5U6 811 aaKnown RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 SEPT1Q8WYJ6 367 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 VTI1AQ96AJ9 217 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MFSD14AQ96MC6 490 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MPHOSPH6Q99547 160 aaKnown RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 SYT11Q9BT88 431 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KIFC3Q9BVG8 833 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 STK33Q9BYT3 514 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 INTS2Q9H0H0 1204 aaKnown RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 POLR3FQ9H1D9 316 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-203ENST00000350034 PORCNQ9H237 461 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 KMT5AQ9NQR1 393 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 MORF4L1Q9UBU8 362 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 PNMA3Q9UL41 463 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 COQ4Q9Y3A0 265 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 DUSP10Q9Y6W6 482 aa7.54□□□□□ -1.2
TRIM55-203ENST00000350034 LRRC37A2A6NM11 1700 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 A0A087X0T9 212 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 RBM47A0AV96 593 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 BTBD19C9JJ37 291 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 F8VZ95 297 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 KIAA0391O15091 583 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 GGPS1O95749 300 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 PGK2P07205 417 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 FAM228BP0C875 321 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 HSPA8P11142 646 aaKnown RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 H2AFXP16104 143 aaPredicted RBP7.53□□□□□ -1.2
TRIM55-203ENST00000350034 PRLRP16471 622 aa7.53□□□□□ -1.2
TRIM55-203ENST00000350034 FERP16591 822 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms