RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 KIAA0391O15091 583 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 UPP2O95045 317 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 EYA4O95677 639 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PYGLP06737 847 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PLCG2P16885 1265 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PRKCIP41743 596 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 TXKP42681 527 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 KIAA1755Q5JYT7 1200 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 WASHC2DQ5SRD0 308 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 C3orf67Q6ZVT6 689 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 MAEAQ7L5Y9 396 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ZNF571Q7Z3V5 609 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 EXOC3L1Q86VI1 746 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ANKLE1Q8NAG6 615 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 EPS8L3Q8TE67 593 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 DNAJC9Q8WXX5 260 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RMDN2Q96LZ7 410 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RPS6KC1Q96S38 1066 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ETNK1Q9HBU6 452 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 CTTNBP2NLQ9P2B4 639 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 KLHL14Q9P2G3 628 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RPS6KL1Q9Y6S9 549 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 SNED1Q8TER0 1413 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 EIF4E1BA6NMX2 242 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RIPK2O43353 540 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 GFPT2O94808 682 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 FGGP02679 453 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PDHA1P08559 390 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ADCY7P51828 1080 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PLTPP55058 493 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ARID5AQ03989 594 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 COASYQ13057 564 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 LRRC23Q53EV4 343 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 ASPRV1Q53RT3 343 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 JAMLQ86YT9 394 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 FBXO25Q8TCJ0 367 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 DNAJC19Q96DA6 116 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 DYNLL2Q96FJ2 89 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 GRHL1Q9NZI5 618 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 MTRF1LQ9UGC7 380 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 AMFRQ9UKV5 643 aa11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHRNA1-202ENST00000348749 PITPNM2Q9BZ72 1349 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 COL16A1Q07092 1604 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 TRAF5O00463 557 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 COQ9O75208 318 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 LMNAP02545 664 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 ATP5DP30049 168 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 MGAT5Q09328 741 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 MAPK7Q13164 816 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 BARGINQ6ZT62 677 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 EYA3Q99504 573 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 GLT8D2Q9H1C3 349 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 CARD9Q9H257 536 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 USP40Q9NVE5 1235 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 LMCD1Q9NZU5 365 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 DLGAP2Q9P1A6 1054 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
CHRNA1-202ENST00000348749 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 TMEM120BA0PK00 339 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 WTIPA6NIX2 430 aaPredicted RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 AFPP02771 609 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 H2AFZP0C0S5 128 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 POTEJP0CG39 1038 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 IMPDH2P12268 514 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 RARGP13631 454 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 KLRK1P26718 216 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 RFC5P40937 340 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 PSMC4P43686 418 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 PTDSS1P48651 473 aaKnown RBP11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 CDK8P49336 464 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 CGB2Q6NT52 195 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 POTEEQ6S8J3 1075 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 VSTM1Q6UX27 236 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 H2AFVQ71UI9 128 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM13CQ8NE31 585 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 FGD4Q96M96 766 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 SERPINB12Q96P63 405 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 MXD3Q9BW11 206 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
CHRNA1-202ENST00000348749 PCMTD2Q9NV79 361 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms