RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 BTNL10A8MVZ5 291 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 CALUO43852 315 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-201ENST00000347613 GAS7O60861 476 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 ENTPD3O75355 529 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 PAFAH1B1P43034 410 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 PTGER2P43116 358 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 HDLBPQ00341 1268 aaKnown RBP6.57□□□□□ -1.36
CLCN3-201ENST00000347613 EN1Q05925 392 aaPredicted RBP6.57□□□□□ -1.36
CLCN3-201ENST00000347613 PPP4R3CPQ6ZMV5 832 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 SLC47A2Q86VL8 602 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 RASGEF1CQ8N431 466 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 RAVER2Q9HCJ3 691 aaKnown RBP6.57□□□□□ -1.36
CLCN3-201ENST00000347613 EMSYQ7Z589 1322 aa6.57□□□□□ -1.36
CLCN3-201ENST00000347613 GCOM1H8Y6P7 765 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FAM13AO94988 1023 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FGGP02679 453 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 POLR2MP0CAP2 368 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 EPB41P11171 864 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 SLC15A2Q16348 729 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 TAF3Q5VWG9 929 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ANKS1BQ7Z6G8 1248 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 NOP9Q86U38 636 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 CBWD2Q8IUF1 395 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FAM178BQ8IXR5 827 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FAM76AQ8TAV0 307 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ACTRT1Q8TDG2 376 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 C18orf8Q96DM3 657 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 IQCDQ96DY2 449 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 SAAL1Q96ER3 474 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 CAPS2Q9BXY5 557 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 LCTP09848 1927 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 WNT10BO00744 389 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 EIF3HO15372 352 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 SLC16A4O15374 487 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 TBCAO75347 108 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 RGS20O76081 388 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 EDN1P05305 212 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PSMC2P35998 433 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FKBP1AP62942 108 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 GPS2Q13227 327 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 RSBN1LQ6PCB5 846 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 EMBQ6PCB8 327 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PADI6Q6TGC4 694 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 MDM1Q8TC05 714 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 BCAS4Q8TDM0 211 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 MXRA8Q9BRK3 442 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PI4K2AQ9BTU6 479 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ISCUQ9H1K1 167 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 VCPKMTQ9H867 229 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 UBE2TQ9NPD8 197 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FBXL5Q9UKA1 691 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PCDHA3Q9Y5H8 950 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 HTTP42858 3142 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 SLC16A3O15427 465 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ZEB2O60315 1214 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 GRIN3BO60391 1043 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PPFIA4O75335 1185 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 FOSP01100 380 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 MMEP08473 750 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 EIF2AK2P19525 551 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 RARRES1P49788 294 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 HSD17B4P51659 736 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 BFSP1Q12934 665 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 BYSLQ13895 437 aaKnown RBP6.56□□□□□ -1.36
CLCN3-201ENST00000347613 SPDYE2Q495Y8 402 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 STYK1Q6J9G0 422 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 ZDHHC24Q6UX98 284 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 TEPSINQ96N21 525 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 PWWP2AQ96N64 755 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 STK33Q9BYT3 514 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 HAPLN2Q9GZV7 340 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 TUFT1Q9NNX1 390 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 APEX2Q9UBZ4 518 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 MGAMO43451 1857 aa6.56□□□□□ -1.36
CLCN3-201ENST00000347613 KRIT1O00522 736 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TUBBP07437 444 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 H2AFZP0C0S5 128 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 VCAM1P19320 739 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 HSPA9P38646 679 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 KCNJ1P48048 391 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 LMBRD2Q68DH5 695 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 NSMFQ6X4W1 530 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 H2AFVQ71UI9 128 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ANO5Q75V66 913 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PEX26Q7Z412 305 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 PRUNE1Q86TP1 453 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 IFT20Q8IY31 132 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ERMNQ8TAM6 284 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 FAM151AQ8WW52 585 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 POMGNT1Q8WZA1 660 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TATDN2Q93075 761 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ZNF341Q9BYN7 854 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TXLNGYQ9BZA5 131 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TMEM117Q9H0C3 514 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TAF1DQ9H5J8 278 aaPredicted RBP6.55□□□□□ -1.36
CLCN3-201ENST00000347613 ZDHHC18Q9NUE0 388 aa6.55□□□□□ -1.36
CLCN3-201ENST00000347613 TMEM110-MUSTN1A8MSY1 372 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms