RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 EIF3DO15371 548 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 CSDE1O75534 798 aaKnown RBP20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 PTENP60484 403 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 KIZQ2M2Z5 673 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 TAF2Q6P1X5 1199 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 FAM126BQ8IXS8 530 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 NELFBQ8WX92 580 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 KCTD10Q9H3F6 313 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 CBX8Q9HC52 389 aa20.92■□□□□ 0.94
CHMP4A-201ENST00000347519 PTK7Q13308 1070 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 TFDP1Q14186 410 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 L1TD1Q5T7N2 865 aaKnown RBP20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 GTPBP4Q9BZE4 634 aaKnown RBP20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 CCDC113Q9H0I3 377 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 RBSNQ9H1K0 784 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 C11orf49Q9H6J7 331 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 TBX20Q9UMR3 447 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 PCDHB13Q9Y5F0 798 aa20.91■□□□□ 0.94
CHMP4A-201ENST00000347519 TTLL13PA6NNM8 815 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 CD4P01730 458 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 IQCF3P0C7M6 154 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 MBTD1Q05BQ5 628 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 IQCB1Q15051 598 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 ANKRD40Q6AI12 368 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 CENPPQ6IPU0 288 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 IFNLR1Q8IU57 520 aaPredicted RBP20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 NLRP7Q8WX94 980 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 KCNN1Q92952 543 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 P2RX5Q93086 422 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 DHTKD1Q96HY7 919 aaPredicted RBP20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 OSMRQ99650 979 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 UBE4BO95155 1302 aa20.9■□□□□ 0.94
CHMP4A-201ENST00000347519 PDE4DIPQ5VU43 2346 aa20.89■□□□□ 0.94
CHMP4A-201ENST00000347519 TISP43B9A030 160 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 TGFB1I1O43294 461 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 CTSHP09668 335 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 CCNE1P24864 410 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 ZNF165P49910 485 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 MRPS6P82932 125 aaKnown RBP20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 POU5F1BQ06416 359 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 MGAT3Q09327 533 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 PAK1Q13153 545 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 NCAPHQ15003 741 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 SNX17Q15036 470 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 TRIM60Q495X7 471 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 ZCWPW2Q504Y3 356 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 RPAINQ86UA6 219 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 DHX40Q8IX18 779 aaKnown RBP20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 NME8Q8N427 588 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 RNF214Q8ND24 703 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 SLC17A8Q8NDX2 589 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 ACCSQ96QU6 501 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 DUSP9Q99956 384 aaKnown RBP20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 OSBPL7Q9BZF2 842 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 TMEM134Q9H6X4 195 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 DACH1Q9UI36 760 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 NOD1Q9Y239 953 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 GINS2Q9Y248 185 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 CDY2AQ9Y6F7 541 aa20.89■□□□□ 0.93
CHMP4A-201ENST00000347519 K7ERI5 159 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 PSMA7O14818 248 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 PQBP1O60828 265 aaKnown RBP20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 CHRNA1P02708 482 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 FGFR4P22455 802 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 ERCC5P28715 1186 aaPredicted RBP20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 THPOP40225 353 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 PHKA2P46019 1235 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 STIM1Q13586 685 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 ALCAMQ13740 583 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 KNOP1Q1ED39 458 aaKnown RBP20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 TTI2Q6NXR4 508 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 SLC39A4Q6P5W5 647 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 ZNF410Q86VK4 478 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 MAP4K3Q8IVH8 894 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 ZBTB8OSQ8IWT0 167 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 AOPEPQ8N6M6 819 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 TMEM40Q8WWA1 233 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 HVCN1Q96D96 273 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 BPIFA3Q9BQP9 254 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 SEZ6LQ9BYH1 1024 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 KCNG1Q9UIX4 513 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 RWDD2AQ9UIY3 292 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 PHLPP2Q6ZVD8 1323 aa20.88■□□□□ 0.93
CHMP4A-201ENST00000347519 ANKRD63C9JTQ0 380 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 TLE2Q04725 743 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 AMHR2Q16671 573 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 LRRC26Q2I0M4 334 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 TRAF7Q6Q0C0 670 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 STXBP4Q6ZWJ1 553 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 UBE2Q1Q7Z7E8 422 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 LUZP1Q86V48 1076 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 SCLT1Q96NL6 688 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 CELF4Q9BZC1 486 aaKnown RBP20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 C2orf40Q9H1Z8 148 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 FZD8Q9H461 694 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 TRPV2Q9Y5S1 764 aa20.87■□□□□ 0.93
CHMP4A-201ENST00000347519 H0YCG3 227 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 INO80B-WBP1J3KQ70 363 aa20.86■□□□□ 0.93
CHMP4A-201ENST00000347519 B4GALT5O43286 388 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms