RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SARS2Q9NP81 518 aaKnown RBP24.6■■□□□ 1.53
NPAS3-201ENST00000346562 MROH7-TTC4A0A0A0MT08 1334 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 PFDN1O60925 122 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 QARSP47897 775 aaKnown RBP24.6■■□□□ 1.53
NPAS3-201ENST00000346562 CUL4AQ13619 759 aa24.6■■□□□ 1.53
NPAS3-201ENST00000346562 VAMP7P51809 220 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 COASYQ13057 564 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 SWSAP1Q6NVH7 229 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 VPS11Q9H270 941 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 MYO5CQ9NQX4 1742 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 ASAP2O43150 1006 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 STX18Q9P2W9 335 aaKnown RBP24.59■■□□□ 1.53
NPAS3-201ENST00000346562 GABBR1Q9UBS5 961 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 COL15A1P39059 1388 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 KRT7P08729 469 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 ZNF579Q8NAF0 562 aaKnown RBP24.59■■□□□ 1.53
NPAS3-201ENST00000346562 SEL1LQ9UBV2 794 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 POTEMA6NI47 508 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 GNA15P30679 374 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 PSMC5P62195 406 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 TADA2BQ86TJ2 420 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 ADORA2BP29275 332 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 GRM4Q14833 912 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 RBBP7Q16576 425 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 SLC26A7Q8TE54 656 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 PITPNM3Q9BZ71 974 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 COG4Q9H9E3 785 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 RNF181Q9P0P0 153 aa24.59■■□□□ 1.53
NPAS3-201ENST00000346562 PVALEFA0A1B0GWK0 134 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 CYP2D6P10635 497 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 KIF17Q9P2E2 1029 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 INTUQ9ULD6 942 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 PLAAQ9Y263 795 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 GPSM2P81274 684 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 NEDD4P46934 1319 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 PPP1R12AO14974 1030 aaPredicted RBP24.58■■□□□ 1.53
NPAS3-201ENST00000346562 ROR1Q01973 937 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 AP1B1Q10567 949 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 KCNV1Q6PIU1 500 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 NUP85Q9BW27 656 aa24.58■■□□□ 1.53
NPAS3-201ENST00000346562 CHCHD3Q9NX63 227 aaKnown RBP24.58■■□□□ 1.53
NPAS3-201ENST00000346562 A0A0G2JND7 137 aa24.58■■□□□ 1.52
NPAS3-201ENST00000346562 ZFXP17010 805 aaPredicted RBP24.58■■□□□ 1.52
NPAS3-201ENST00000346562 PSMC1P62191 440 aaKnown RBP24.58■■□□□ 1.52
NPAS3-201ENST00000346562 CC2D1AQ6P1N0 951 aaPredicted RBP24.58■■□□□ 1.52
NPAS3-201ENST00000346562 ZNF564Q8TBZ8 553 aaPredicted RBP24.58■■□□□ 1.52
NPAS3-201ENST00000346562 INTS2Q9H0H0 1204 aaKnown RBP24.58■■□□□ 1.52
NPAS3-201ENST00000346562 NFU1Q9UMS0 254 aa24.58■■□□□ 1.52
NPAS3-201ENST00000346562 RCAN1P53805 252 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 TAS2R42Q7RTR8 314 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 C11orf70Q9BRQ4 267 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 HEMGNQ9BXL5 484 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 PARD6BQ9BYG5 372 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 PPARGC1AQ9UBK2 798 aaKnown RBP24.57■■□□□ 1.52
NPAS3-201ENST00000346562 RPSAP08865 295 aaKnown RBP24.57■■□□□ 1.52
NPAS3-201ENST00000346562 GRAMD1BQ3KR37 738 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 BTBD8Q5XKL5 378 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 ANKS3Q6ZW76 656 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 TRIML2Q8N7C3 387 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 NME3Q13232 169 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 CD209Q9NNX6 404 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 CDK12Q9NYV4 1490 aaPredicted RBP24.57■■□□□ 1.52
NPAS3-201ENST00000346562 STAT3P40763 770 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 ST13P4Q8IZP2 240 aaPredicted RBP24.57■■□□□ 1.52
NPAS3-201ENST00000346562 MORC4Q8TE76 937 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 EXOC4Q96A65 974 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 ASPSCR1Q9BZE9 553 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 WDR19Q8NEZ3 1342 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 MORF4L2Q15014 288 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 KNOP1Q1ED39 458 aaKnown RBP24.57■■□□□ 1.52
NPAS3-201ENST00000346562 ENOSF1Q7L5Y1 443 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 CENPKQ9BS16 269 aa24.57■■□□□ 1.52
NPAS3-201ENST00000346562 FRMD3A2A2Y4 597 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 NUGGCQ68CJ6 796 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 TRIM72Q6ZMU5 477 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 GPD1LQ8N335 351 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 RMDN2Q96LZ7 410 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 E9PMD0 336 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 EFCAB14O75071 495 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 TAP1Q03518 808 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 RBM46Q8TBY0 533 aaKnown RBP24.56■■□□□ 1.52
NPAS3-201ENST00000346562 AIFM3Q96NN9 605 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 RRP15Q9Y3B9 282 aaKnown RBP24.56■■□□□ 1.52
NPAS3-201ENST00000346562 A8MXQ7 604 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 MINPP1Q9UNW1 487 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 RASA4BC9J798 803 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 RASA4O43374 803 aa24.56■■□□□ 1.52
NPAS3-201ENST00000346562 FAM217BQ9NTX9 383 aaPredicted RBP24.56■■□□□ 1.52
NPAS3-201ENST00000346562 LGALS16A8MUM7 142 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 EPM2AIP1Q7L775 607 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-201ENST00000346562 TSSK1BQ9BXA7 367 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 NDFIP2Q9NV92 336 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 OCM2P0CE71 109 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 OCMP0CE72 109 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-201ENST00000346562 PEX19P40855 299 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 PRAMEP78395 509 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 OTUD5Q96G74 571 aa24.55■■□□□ 1.52
NPAS3-201ENST00000346562 NR1H4Q96RI1 486 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-201ENST00000346562 GPBP1L1Q9HC44 474 aaPredicted RBP24.55■■□□□ 1.52
NPAS3-201ENST00000346562 TBC1D19Q8N5T2 526 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms