RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 VWA8A3KMH1 1905 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 KLF18A0A0U1RQI7 1052 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 RXRBP28702 533 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 IRAK1P51617 712 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 RNF19BQ6ZMZ0 732 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 UBE2J2Q8N2K1 259 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 NAPGQ99747 312 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 TMEM94Q12767 1356 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 DDHD2O94830 711 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 C6orf118Q5T5N4 469 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 STOML1Q9UBI4 398 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 MAD1L1Q9Y6D9 718 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ZNF609O15014 1411 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FAM153BP0C7A2 387 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ST13P50502 369 aaKnown RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CLCN6P51797 869 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ATP8B2P98198 1209 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FAM153CQ494X1 144 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 THEMIS2Q5TEJ8 643 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FAM153AQ9UHL3 310 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 NFU1Q9UMS0 254 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SPCS2Q15005 226 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 MCF2L2Q86YR7 1114 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 NME8Q8N427 588 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CNNM2Q9H8M5 875 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FBRSQ9HAH7 460 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 TSC22D4Q9Y3Q8 395 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ARHGAP23Q9P227 1491 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ZBTB39O15060 712 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ESRRBO95718 433 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ABCB4P21439 1286 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CFAP221Q4G0U5 840 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SLC44A4Q53GD3 710 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SAMD3Q8N6K7 520 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ACSF2Q96CM8 615 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CEP72Q9P209 647 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 HEMK1Q9Y5R4 338 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 VAMP4O75379 141 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 RNF135Q8IUD6 432 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ASCC2Q9H1I8 757 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 PCSK1NQ9UHG2 260 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SH3BGRLO75368 114 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 GSTA3Q16772 222 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 LAYNQ6UX15 382 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 TRIM22Q8IYM9 498 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 CNPY3Q9BT09 278 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 NOP53Q9NZM5 478 aaKnown RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ADGRB1O14514 1584 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 NR4A1P22736 598 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SLC16A2P36021 539 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 RABGGTBP53611 331 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ARL6IP4Q66PJ3 421 aaKnown RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 ANKRD40Q6AI12 368 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 PI16Q6UXB8 463 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 Q9H521 79 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 IFT122Q9HBG6 1241 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 COQ3Q9NZJ6 369 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 RHOBTB1O94844 696 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 KRT75O95678 551 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 HSPA9P38646 679 aaKnown RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 IARSP41252 1262 aaKnown RBP3.79□□□□□ -1.8
SYNE1-201ENST00000341594 VPS72Q15906 364 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 SYCE1Q8N0S2 351 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 TMEM130Q8N3G9 435 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 STKLD1Q8NE28 680 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 LZTS2Q9BRK4 669 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 FUCA2Q9BTY2 467 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 IRF2BPLQ9H1B7 796 aa3.79□□□□□ -1.8
SYNE1-201ENST00000341594 KRT13P13646 458 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 HSD3B2P26439 372 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 FLT3P36888 993 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 SLC25A41Q8N5S1 370 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 CATSPER1Q8NEC5 780 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 TOP1MTQ969P6 601 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 DYNLL2Q96FJ2 89 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 MICU1Q9BPX6 476 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 LRRC42Q9Y546 428 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 V9GYQ6 96 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 EEF1GP26641 437 aaKnown RBP3.78□□□□□ -1.8
SYNE1-201ENST00000341594 TBCCQ15814 346 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 ECT2Q9H8V3 914 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 PTPRDP23468 1912 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 A0A1W2PQC6 194 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 ZMPSTE24O75844 475 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 WFS1O76024 890 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 SUN1O94901 812 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 KRT4P19013 534 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 LONRF2Q1L5Z9 754 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 USP49Q70CQ1 688 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 TTC8Q8TAM2 541 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 CNOT7Q9UIV1 285 aaKnown RBP3.78□□□□□ -1.8
SYNE1-201ENST00000341594 PLXNA2O75051 1894 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 TSC22D2O75157 780 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 FSTL1Q12841 308 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 COLGALT2Q8IYK4 626 aa3.78□□□□□ -1.8
SYNE1-201ENST00000341594 ST13P4Q8IZP2 240 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-201ENST00000341594 ARL6IP6Q8N6S5 226 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms