RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SLFN11Q7Z7L1 901 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 PALB2Q86YC2 1186 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 C4orf19Q8IY42 314 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 ZKSCAN4Q969J2 545 aaPredicted RBP21.82■■□□□ 1.08
SPG7-202ENST00000341316 TMEM59LQ9UK28 342 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 INTUQ9ULD6 942 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 STXBP5LQ9Y2K9 1186 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 A0A0A6YYK5 440 aaPredicted RBP21.82■■□□□ 1.08
SPG7-202ENST00000341316 FOXN3O00409 490 aaPredicted RBP21.82■■□□□ 1.08
SPG7-202ENST00000341316 TNFRSF8P28908 595 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 VAMP7P51809 220 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 GTF2BQ00403 316 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 ARHGEF16Q5VV41 709 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 TSEN2Q8NCE0 465 aaKnown RBP21.82■■□□□ 1.08
SPG7-202ENST00000341316 TAF4BQ92750 862 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 OSGEPQ9NPF4 335 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 GDF3Q9NR23 364 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 TAS2R14Q9NYV8 317 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 HSPBP1Q9NZL4 362 aa21.82■■□□□ 1.08
SPG7-202ENST00000341316 CTDP1Q9Y5B0 961 aaPredicted RBP21.82■■□□□ 1.08
SPG7-202ENST00000341316 IGSF9BQ9UPX0 1349 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 HEXIM1O94992 359 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 KRT13P13646 458 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 RPS12P25398 132 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 GCLMP48507 274 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 CARSP49589 748 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 EPHB4P54760 987 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 CORO7P57737 925 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 SF3B2Q13435 895 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 IFI16Q16666 785 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 ARHGEF19Q8IW93 802 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 GINM1Q9NU53 330 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 CNOT7Q9UIV1 285 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 TELO2Q9Y4R8 837 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 CES2O00748 559 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 MAGEA9P43362 315 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 PSMC5P62195 406 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 GUCY2DQ02846 1103 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 ALCAMQ13740 583 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 TRADDQ15628 312 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 INTS8Q75QN2 995 aaKnown RBP21.81■■□□□ 1.08
SPG7-202ENST00000341316 C12orf56Q8IXR9 622 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 METTL13Q8N6R0 699 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 TMEM174Q8WUU8 243 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 SH3GL2Q99962 352 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 EPB41L5Q9HCM4 733 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 RNF146Q9NTX7 359 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 GJA3Q9Y6H8 435 aa21.81■■□□□ 1.08
SPG7-202ENST00000341316 LMNB1P20700 586 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 BACE1P56817 501 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 XKR9Q5GH70 373 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 ANO5Q75V66 913 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 CCDC43Q96MW1 224 aaKnown RBP21.8■■□□□ 1.08
SPG7-202ENST00000341316 KIFC3Q9BVG8 833 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 WDR64B1ANS9 1081 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 GOLGA8KD6RF30 607 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 IRAK1P51617 712 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 PPFIA1Q13136 1202 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 FAM102BQ5T8I3 360 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 EMBQ6PCB8 327 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 NT5DC3Q86UY8 548 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 KLHL7Q8IXQ5 586 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 SAMD3Q8N6K7 520 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 XXYLT1Q8NBI6 393 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 REPS2Q8NFH8 660 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 ST6GALNAC4Q9H4F1 302 aa21.8■■□□□ 1.08
SPG7-202ENST00000341316 GOLGA8IPA6NC78 632 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 GOLGA8JA6NMD2 632 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 RAD51CO43502 376 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 CEP104O60308 925 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 FAM153BP0C7A2 387 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 ABCB4P21439 1286 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 NCKAP1LP55160 1127 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 KIF22Q14807 665 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 FAM153CQ494X1 144 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 DNAJC21Q5F1R6 531 aaKnown RBP21.79■■□□□ 1.08
SPG7-202ENST00000341316 PEX26Q7Z412 305 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 DAAM2Q86T65 1068 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 SLC35G2Q8TBE7 412 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 SLC20A1Q8WUM9 679 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 ARHGEF26Q96DR7 871 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 PBKQ96KB5 322 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 UBE2TQ9NPD8 197 aaPredicted RBP21.79■■□□□ 1.08
SPG7-202ENST00000341316 FAM153AQ9UHL3 310 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 NFU1Q9UMS0 254 aa21.79■■□□□ 1.08
SPG7-202ENST00000341316 ADRB2P07550 413 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 JAK3P52333 1124 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 SOX10P56693 466 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 EPC2Q52LR7 807 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 IFT20Q8IY31 132 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 ACTRT1Q8TDG2 376 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 CASKIN2Q8WXE0 1202 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 CAVIN3Q969G5 261 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 ANKRD63C9JTQ0 380 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 BUB1BO60566 1050 aaPredicted RBP21.78■■□□□ 1.08
SPG7-202ENST00000341316 TMEM253P0C7T8 217 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 PTPRAP18433 802 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 ADSSP30520 456 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 KRT76Q01546 638 aa21.78■■□□□ 1.08
SPG7-202ENST00000341316 KCTD19Q17RG1 926 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms