RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 TMEM87BQ96K49 555 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 ZNF577Q9BSK1 485 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 DACT1Q9NYF0 836 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 CEP131Q9UPN4 1083 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 SLC12A7Q9Y666 1083 aa18.52■□□□□ 0.56
NECTIN1-202ENST00000340882 DDHD2O94830 711 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 PSAPP07602 524 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 TMOD1P28289 359 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 UGCGQ16739 394 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 NLRP7Q8WX94 980 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 SCLT1Q96NL6 688 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 MAN1C1Q9NR34 630 aa18.51■□□□□ 0.55
NECTIN1-202ENST00000340882 MAP1BP46821 2468 aaKnown RBP18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 RFPL2O75678 378 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 CYP3A4P08684 503 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 SRFP11831 508 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 RFX1P22670 979 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 AP3B2Q13367 1082 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 PPP1R18Q6NYC8 613 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 TAS1R1Q7RTX1 841 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 C1orf210Q8IVY1 113 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 EMILIN2Q9BXX0 1053 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 FOXQ1Q9C009 403 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 WDR6Q9NNW5 1121 aaKnown RBP18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 TBC1D22BQ9NU19 505 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 EPS15L1Q9UBC2 864 aa18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
NECTIN1-202ENST00000340882 C2CD2LO14523 706 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 OATP04181 439 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 PRKCEQ02156 737 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 TWF2Q6IBS0 349 aaKnown RBP18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 PHLDB3Q6NSJ2 640 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 GLB1LQ6UWU2 654 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 CHST12Q9NRB3 414 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 FAM105AQ9NUU6 356 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 BARHL2Q9NY43 387 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 SIT1Q9Y3P8 196 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 CLUHO75153 1309 aa18.49■□□□□ 0.55
NECTIN1-202ENST00000340882 A0A087WZ62 844 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 TMEM150BA6NC51 233 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 SGMS1Q86VZ5 419 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 ZNF707Q96C28 371 aaPredicted RBP18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 FAM167AQ96KS9 214 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 SH2D3AQ9BRG2 576 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 FDXACB1Q9BRP7 624 aaPredicted RBP18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 ARHGEF3Q9NR81 526 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 SAMM50Q9Y512 469 aa18.48■□□□□ 0.55
NECTIN1-202ENST00000340882 CFAP47Q6ZTR5 3102 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 INPPL1O15357 1258 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 EDIL3O43854 480 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 SPATA31D3P0C874 917 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 TARBP2Q15633 366 aaKnown RBP18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 ZC3H14Q6PJT7 736 aaKnown RBP18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 AGMOQ6ZNB7 445 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 SPATA31D4Q6ZUB0 917 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 ZNF710Q8N1W2 664 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 LENG9Q96B70 501 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 CEP89Q96ST8 783 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 RPP25Q9BUL9 199 aaKnown RBP18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 GCOM2Q9BZD3 368 aaPredicted RBP18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 NRBP2Q9NSY0 501 aa18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 PIN4Q9Y237 131 aaKnown RBP18.47■□□□□ 0.55
NECTIN1-202ENST00000340882 SLC27A2O14975 620 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 TEX28O15482 410 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 ATXN1P54253 815 aaKnown RBP18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 PRR16Q569H4 304 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 DCLRE1AQ6PJP8 1040 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 APOA5Q6Q788 366 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 KSR1Q8IVT5 923 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 TEX2Q8IWB9 1127 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 PJA1Q8NG27 643 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 GJA10Q969M2 543 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 MRPL17Q9NRX2 175 aaKnown RBP18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 MARCH5Q9NX47 278 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 TDRD15B5MCY1 1934 aaKnown RBP18.46■□□□□ 0.55
NECTIN1-202ENST00000340882 NRP1O14786 923 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 ZNF623O75123 536 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 STBD1O95210 358 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 LAMP2P13473 410 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 AK2P54819 239 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 HTR4Q13639 388 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 NONOQ15233 471 aaKnown RBP eCLIP18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 SMG7Q92540 1137 aaKnown RBP18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 RPS6KC1Q96S38 1066 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 LSG1Q9H089 658 aaKnown RBP18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 DISC1Q9NRI5 854 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 FAM217BQ9NTX9 383 aaPredicted RBP18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 TCEAL9Q9UHQ7 104 aa18.45■□□□□ 0.54
NECTIN1-202ENST00000340882 WDR64B1ANS9 1081 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 ANHXE9PGG2 379 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 F8W810 466 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 EFEMP2O95967 443 aa18.44■□□□□ 0.54
NECTIN1-202ENST00000340882 SOD2P04179 222 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms