RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LAMB1P07942 1786 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 DDX3YO15523 660 aaKnown RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 KCNJ2P63252 427 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 SLF2Q8IX21 1173 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 PPM1KQ8N3J5 372 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 KCNV2Q8TDN2 545 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 ASIC3Q9UHC3 531 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 STXBP5LQ9Y2K9 1186 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 COMTP21964 271 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 ELF1P32519 619 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 C10orf76Q5T2E6 689 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 BARGINQ6ZT62 677 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 FAM47EQ6ZV65 393 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 SLFN12Q8IYM2 578 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
SCARB1-202ENST00000339570 TRAF3IP3Q9Y228 551 aa17.41■□□□□ 0.38
SCARB1-202ENST00000339570 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 TCP11X1B4DZS4 312 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 AGBL2Q5U5Z8 902 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 NUGGCQ68CJ6 796 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 CDC42EP5Q6NZY7 148 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 LLGL2Q6P1M3 1020 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 FBXO11Q86XK2 927 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 ARHGEF19Q8IW93 802 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 DDTLA6NHG4 134 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-202ENST00000339570 RASGRF2O14827 1237 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 PYGMP11217 842 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 RPA1P27694 616 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 ICA1Q05084 483 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 MTM1Q13496 603 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 HEMGNQ9BXL5 484 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 FAM129AQ9BZQ8 928 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 ACTR5Q9H9F9 607 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-202ENST00000339570 NOD2Q9HC29 1040 aa17.4■□□□□ 0.38
SCARB1-202ENST00000339570 UBOX5O94941 541 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 GH1P01241 217 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 LMNB1P20700 586 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 MARSP56192 900 aaKnown RBP17.39■□□□□ 0.38
SCARB1-202ENST00000339570 ERMARDQ5T6L9 678 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 YTHDF3Q7Z739 585 aaKnown RBP17.39■□□□□ 0.38
SCARB1-202ENST00000339570 TAB3Q8N5C8 712 aaPredicted RBP17.39■□□□□ 0.38
SCARB1-202ENST00000339570 ETNPPLQ8TBG4 499 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 CCT6BQ92526 530 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 METTL14Q9HCE5 456 aaKnown RBP17.39■□□□□ 0.38
SCARB1-202ENST00000339570 SWAP70Q9UH65 585 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 AGAP1Q9UPQ3 857 aa17.39■□□□□ 0.38
SCARB1-202ENST00000339570 ATF5Q9Y2D1 282 aaPredicted RBP17.39■□□□□ 0.38
SCARB1-202ENST00000339570 EMSYQ7Z589 1322 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 F5H6K3 240 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 CLDN3O15551 220 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 PTENP60484 403 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 KLRC3Q07444 240 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 SPIRE1Q08AE8 756 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 ORC2Q13416 577 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 LRCH2Q5VUJ6 765 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 PABPC3Q9H361 631 aaKnown RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 PNMA3Q9UL41 463 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 KIAA0391O15091 583 aaKnown RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 SERPINB2P05120 415 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 JAM2P57087 298 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 ELF3P78545 371 aaPredicted RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 MAPK7Q13164 816 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 PRELID2Q8N945 189 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 ZNF622Q969S3 477 aaKnown RBP eCLIP17.39■□□□□ 0.371e-7■□□□□ 9.5
SCARB1-202ENST00000339570 EPB41L4BQ9H329 900 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 VEZTQ9HBM0 779 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 RASAL2Q9UJF2 1139 aa17.39■□□□□ 0.37
SCARB1-202ENST00000339570 SCAF8Q9UPN6 1271 aaKnown RBP17.39■□□□□ 0.37
SCARB1-202ENST00000339570 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 SGPL1O95470 568 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 SNHG28P0DPA3 235 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 PAX7P23759 505 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 FAM182AQ5T1J6 154 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 SEL1L2Q5TEA6 688 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 DUPD1Q68J44 220 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 ZDHHC24Q6UX98 284 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
SCARB1-202ENST00000339570 AMNQ9BXJ7 453 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 SMCHD1A6NHR9 2005 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 CCDC169A6NNP5 214 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 K7ENM7 598 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 CYP26A1O43174 497 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 NEBLO76041 1014 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 ATP2B4P23634 1241 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 PRKCIP41743 596 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 GABPAQ06546 454 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 DNAJC18Q9H819 358 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 PARVGQ9HBI0 331 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 MTRF1LQ9UGC7 380 aaKnown RBP17.38■□□□□ 0.37
SCARB1-202ENST00000339570 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
SCARB1-202ENST00000339570 SORBS3O60504 671 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 GSCP56915 257 aaPredicted RBP17.37■□□□□ 0.37
SCARB1-202ENST00000339570 RASGEF1CQ8N431 466 aa17.37■□□□□ 0.37
SCARB1-202ENST00000339570 STK33Q9BYT3 514 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms