RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CDHR1Q96JP9 859 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 SPAG5Q96R06 1193 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 CEP89Q96ST8 783 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 HINFPQ9BQA5 517 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 HAPLN2Q9GZV7 340 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 POLR3FQ9H1D9 316 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 GOLPH3Q9H4A6 298 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 AIPL1Q9NZN9 384 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 DDX41Q9UJV9 622 aaKnown RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 BTBD19C9JJ37 291 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 PDHXO00330 501 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 SERPING1P05155 500 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 MAPTP10636 758 aaKnown RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 CXCR5P32302 372 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 AMPD2Q01433 879 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 NFIL3Q16649 462 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 KCTD19Q17RG1 926 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC9C1Q4G0N8 1177 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 SEZ6Q53EL9 994 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 LMBRD2Q68DH5 695 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 STXBP4Q6ZWJ1 553 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 MNS1Q8NEH6 495 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 RDM1Q8NG50 284 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 CAPZA3Q96KX2 299 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 MMP19Q99542 508 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 NAPGQ99747 312 aaPredicted RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 PTPN18Q99952 460 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 NTPCRQ9BSD7 190 aaKnown RBP8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 GPR88Q9GZN0 384 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 PLCB1Q9NQ66 1216 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 FBXO40Q9UH90 709 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 IGSF9BQ9UPX0 1349 aa8.07□□□□□ -1.12
SRFBP1-201ENST00000339397 NCK2O43639 380 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 KRT86O43790 486 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 STAM2O75886 525 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 DGAT1O75907 488 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 IPO7O95373 1038 aaKnown RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 LCA5LO95447 670 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 OATP04181 439 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 GLRA2P23416 452 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 VAMP7P51809 220 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SMTNP53814 917 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 POLGP54098 1239 aaPredicted RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 JAM2P57087 298 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 KIF5AQ12840 1032 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SNAPC2Q13487 334 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 KCTD2Q14681 263 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 EMC2Q15006 297 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 XKR3Q5GH77 459 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 ZBTB41Q5SVQ8 909 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 TEX35Q5T0J7 233 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 PALB2Q86YC2 1186 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SLC9A9Q8IVB4 645 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 XXYLT1Q8NBI6 393 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 BRI3BPQ8WY22 251 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SEMA4DQ92854 862 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 TMEM206Q9H813 350 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SMARCAL1Q9NZC9 954 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 CDC23Q9UJX2 597 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 DNAJC12Q9UKB3 198 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 IGKV6D-21A0A0A0MT36 114 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 FOXN3O00409 490 aaPredicted RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 HNRNPDLO14979 420 aaKnown RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 CALCAP01258 141 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 KLRC1P26715 233 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 DNA2P51530 1060 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 STAT5BP51692 787 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 MAP2K1Q02750 393 aaPredicted RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 DRAP1Q14919 205 aaPredicted RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 ASIC2Q16515 512 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SNRNP35Q16560 246 aaKnown RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 FASTKD5Q7L8L6 764 aaKnown RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 MAP4K3Q8IVH8 894 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 ARHGEF19Q8IW93 802 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 PDCL2Q8N4E4 241 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 LRRC71Q8N4P6 559 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 OLIG1Q8TAK6 271 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 MKNK1Q9BUB5 465 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 EDEM3Q9BZQ6 932 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 TMEM117Q9H0C3 514 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 ATP6V0A4Q9HBG4 840 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 EHD2Q9NZN4 543 aa8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 LAMA2P24043 3122 aaKnown RBP8.06□□□□□ -1.12
SRFBP1-201ENST00000339397 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 SSU72P8A0A1W2PR75 194 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 LRRIQ4A6NIV6 560 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 TMCO5BA8MYB1 307 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 PDE2AO00408 941 aaPredicted RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 EVI5O60447 810 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 CSDE1O75534 798 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 DLATP10515 647 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 ACOT2P49753 483 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 MRPS25P82663 173 aaKnown RBP8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 MYL7Q01449 175 aa8.05□□□□□ -1.12
SRFBP1-201ENST00000339397 MKRN4PQ13434 485 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms