RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 A0A087WZ62 844 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 CARNS1A5YM72 827 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 TMEM150BA6NC51 233 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 TDP2O95551 362 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 AVPR2P30518 371 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 EVCP57679 992 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 MTMR3Q13615 1198 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 GLB1LQ6UWU2 654 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 TMEM173Q86WV6 379 aaPredicted RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 VPS52Q8N1B4 723 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 KREMEN2Q8NCW0 462 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 SH2D3AQ9BRG2 576 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 INO80BQ9C086 356 aaPredicted RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
LINC01116-202ENST00000339037 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
LINC01116-202ENST00000339037 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 IGKV6-21A0A0C4DH24 114 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 C2CD4DB7Z1M9 353 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 CXCL14O95715 111 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 SKIP12755 728 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 MTHFRP42898 656 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 LONRF3Q496Y0 759 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 B3GNT9Q6UX72 402 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 RHPN2Q8IUC4 686 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 UBALD2Q8IYN6 164 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 LPPQ93052 612 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 RIPOR3Q96MK2 946 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 CEP89Q96ST8 783 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 DZANK1Q9NVP4 752 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 SUCLA2Q9P2R7 463 aaPredicted RBP17.55■□□□□ 0.4
LINC01116-202ENST00000339037 SORCS3Q9UPU3 1222 aa17.55■□□□□ 0.4
LINC01116-202ENST00000339037 CYP3A7-CYP3A51PA0A087WV96 503 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 REC8O95072 547 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 STBD1O95210 358 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
LINC01116-202ENST00000339037 CYP3A7P24462 503 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 RAB27AP51159 221 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 POLGP54098 1239 aaPredicted RBP17.54■□□□□ 0.4
LINC01116-202ENST00000339037 RNASELQ05823 741 aaKnown RBP17.54■□□□□ 0.4
LINC01116-202ENST00000339037 ETNPPLQ8TBG4 499 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 IGSF21Q96ID5 467 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 NLRP4Q96MN2 994 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 JPH2Q9BR39 696 aaPredicted RBP17.54■□□□□ 0.4
LINC01116-202ENST00000339037 FAM105AQ9NUU6 356 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 TBC1D13Q9NVG8 400 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 INPP5FQ9Y2H2 1132 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
LINC01116-202ENST00000339037 RIF1Q5UIP0 2472 aaKnown RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 DDX11L8A8MPP1 907 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 CPLX1O14810 134 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 BRD1O95696 1058 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 WEE2P0C1S8 567 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 GIT2Q14161 759 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 NOMO2Q5JPE7 1267 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 MOXD1Q6UVY6 613 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 ANO5Q75V66 913 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 DDX53Q86TM3 631 aaKnown RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 BLIDQ8IZY5 108 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 TDRD5Q8NAT2 981 aaKnown RBP17.53■□□□□ 0.4
LINC01116-202ENST00000339037 AUTS2Q8WXX7 1259 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 IRF2BPLQ9H1B7 796 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 FAM86C1Q9NVL1 165 aa17.53■□□□□ 0.4
LINC01116-202ENST00000339037 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
LINC01116-202ENST00000339037 MEIS3P2A8K0S8 358 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 ST18O60284 1047 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 DEXIO95424 95 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 CTSAP10619 480 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 PSMC5P62195 406 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 ATAT1Q5SQI0 421 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 PLA2G4FQ68DD2 849 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 KIAA1841Q6NSI8 718 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 RUFY3Q7L099 469 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 KSR1Q8IVT5 923 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 C12orf76Q8N812 135 aaPredicted RBP17.52■□□□□ 0.4
LINC01116-202ENST00000339037 BCL7CQ8WUZ0 217 aaPredicted RBP17.52■□□□□ 0.4
LINC01116-202ENST00000339037 SLC7A3Q8WY07 619 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 MBOAT7Q96N66 472 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 GBP3Q9H0R5 595 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 NRDE2Q9H7Z3 1164 aa17.52■□□□□ 0.4
LINC01116-202ENST00000339037 DDX25Q9UHL0 483 aaKnown RBP17.52■□□□□ 0.4
LINC01116-202ENST00000339037 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
LINC01116-202ENST00000339037 SPTBN4Q9H254 2564 aa17.52■□□□□ 0.39
LINC01116-202ENST00000339037 M0R2N6 131 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 HAX1O00165 279 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 ZNF623O75123 536 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 GALTP07902 379 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 EPCAMP16422 314 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 TOB2Q14106 344 aaPredicted RBP17.51■□□□□ 0.39
LINC01116-202ENST00000339037 NONOQ15233 471 aaKnown RBP eCLIP17.51■□□□□ 0.39
LINC01116-202ENST00000339037 GALNT17Q6IS24 598 aa17.51■□□□□ 0.39
LINC01116-202ENST00000339037 CABP7Q86V35 215 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms