RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 SHROOM1Q2M3G4 852 aaPredicted RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 FOXB2Q5VYV0 432 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 UNC13DQ70J99 1090 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 IRF2BP2Q7Z5L9 587 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF513Q8N8E2 541 aaPredicted RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 NEK9Q8TD19 979 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 SETDB2Q96T68 719 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 SH2D3AQ9BRG2 576 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 RAB17Q9H0T7 212 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 C12orf65Q9H3J6 166 aaKnown RBP11.98□□□□□ -0.49
CCDC87-201ENST00000333861 ARHGEF3Q9NR81 526 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 BARHL2Q9NY43 387 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 NARFQ9UHQ1 456 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 HDAC9Q9UKV0 1011 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L15C9J2P7 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L13C9JLJ4 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L11C9JVI0 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L18D6R9N7 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L22D6RA61 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L17D6RBQ6 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L19D6RCP7 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L20D6RJB6 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 ETS2P15036 469 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 DR1Q01658 176 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L24Q0WX57 530 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 GPBP1Q86WP2 473 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 ZNF444Q8N0Y2 327 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SLC35G2Q8TBE7 412 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 MYH3P11055 1940 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SSU72P8A0A1W2PR75 194 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 TMEM120BA0PK00 339 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 UCHL3P15374 230 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SP100P23497 879 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 EPHB2P29323 1055 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 RPL21P46778 160 aaKnown RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 IFI16Q16666 785 aaKnown RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 EXOC3L1Q86VI1 746 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 NBPF5PQ86XG9 351 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 RAD54LQ92698 747 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 THAP2Q9H0W7 228 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 NID2Q14112 1375 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SBF2Q86WG5 1849 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 NTSR2O95665 410 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 PTDSS1P48651 473 aaKnown RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 PDE6CP51160 858 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 PICALMQ13492 652 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 GALNTL6Q49A17 601 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SYCP3Q8IZU3 236 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 LRRC57Q8N9N7 239 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 LNX1Q8TBB1 728 aaPredicted RBP11.97□□□□□ -0.49
CCDC87-201ENST00000333861 DTX3LQ8TDB6 740 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 NUP98P52948 1817 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
CCDC87-201ENST00000333861 SUN1O94901 812 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 CBX6O95503 412 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 FKBP3Q00688 224 aaKnown RBP11.96□□□□□ -0.49
CCDC87-201ENST00000333861 AMPD3Q01432 767 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 CYP4X1Q8N118 509 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 FBF1Q8TES7 1133 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 C1orf54Q8WWF1 131 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 ATG4AQ8WYN0 398 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 GORASP1Q9BQQ3 440 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 PYM1Q9BRP8 204 aaKnown RBP11.96□□□□□ -0.49
CCDC87-201ENST00000333861 CRNKL1Q9BZJ0 848 aaKnown RBP11.96□□□□□ -0.49
CCDC87-201ENST00000333861 GANQ9H2C0 597 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 PABPC3Q9H361 631 aaKnown RBP11.96□□□□□ -0.49
CCDC87-201ENST00000333861 RGL1Q9NZL6 768 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 DAAM1Q9Y4D1 1078 aa11.96□□□□□ -0.49
CCDC87-201ENST00000333861 PEX11AO75192 247 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 PPFIA2O75334 1257 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.5
CCDC87-201ENST00000333861 ZCCHC18P0CG32 403 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 MUM1Q2TAK8 710 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 CAVIN4Q5BKX8 364 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 KRT79Q5XKE5 535 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 LLGL2Q6P1M3 1020 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 SPATA21Q7Z572 469 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 VSIG1Q86XK7 387 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 KIAA0825Q8IV33 1275 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 MFN1Q8IWA4 741 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 GALNT15Q8N3T1 639 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 SLC20A1Q8WUM9 679 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 DNAJC19Q96DA6 116 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 ERP27Q96DN0 273 aa11.96□□□□□ -0.5
CCDC87-201ENST00000333861 ALG13Q9NP73 1137 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms