RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 SYKP43405 635 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 RAB30Q15771 203 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 TCTN1Q2MV58 587 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 ARSHQ5FYA8 562 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 IFNLR1Q8IU57 520 aaPredicted RBP22.66■■□□□ 1.22
MRPL40-201ENST00000333130 TNMDQ9H2S6 317 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 CHST12Q9NRB3 414 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 KBTBD4Q9NVX7 518 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 LARSQ9P2J5 1176 aaKnown RBP22.66■■□□□ 1.22
MRPL40-201ENST00000333130 USP25Q9UHP3 1055 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 MSRAQ9UJ68 235 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 LAMA3Q16787 3333 aa22.66■■□□□ 1.22
MRPL40-201ENST00000333130 ACTN4O43707 911 aaKnown RBP22.65■■□□□ 1.22
MRPL40-201ENST00000333130 EFNA5P52803 228 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 SMTNP53814 917 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 UBE2HP62256 183 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 DEFB103AP81534 67 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 RAD51AP2Q09MP3 1159 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 HERC6Q8IVU3 1022 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 ENGASEQ8NFI3 743 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 ADAM2Q99965 735 aa22.65■■□□□ 1.22
MRPL40-201ENST00000333130 PIN4Q9Y237 131 aaKnown RBP22.65■■□□□ 1.22
MRPL40-201ENST00000333130 CCDC169A6NNP5 214 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 PRPF40AO75400 957 aaKnown RBP22.64■■□□□ 1.22
MRPL40-201ENST00000333130 CSDE1O75534 798 aaKnown RBP22.64■■□□□ 1.22
MRPL40-201ENST00000333130 FAM13AO94988 1023 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 SLFN14P0C7P3 912 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 STAG3L1P0CL83 205 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 FGFR4P22455 802 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 AMPD3Q01432 767 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 CDCA2Q69YH5 1023 aaPredicted RBP22.64■■□□□ 1.22
MRPL40-201ENST00000333130 FMR1NBQ8N0W7 255 aaPredicted RBP22.64■■□□□ 1.22
MRPL40-201ENST00000333130 LRFN2Q9ULH4 789 aa22.64■■□□□ 1.22
MRPL40-201ENST00000333130 ENPP3O14638 875 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 AXLP30530 894 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PEX3P56589 373 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 FAM160A1Q05DH4 1040 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 MAPK7Q13164 816 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 SNW1Q13573 536 aaKnown RBP22.63■■□□□ 1.21
MRPL40-201ENST00000333130 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.63■■□□□ 1.211e-8■■□□□ 13.6
MRPL40-201ENST00000333130 SLC24A5Q71RS6 500 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 DAW1Q8N136 415 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 TMX1Q9H3N1 280 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 KMT5AQ9NQR1 393 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 RGS18Q9NS28 235 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 AGPAT5Q9NUQ2 364 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PRMT7Q9NVM4 692 aaPredicted RBP22.63■■□□□ 1.21
MRPL40-201ENST00000333130 LAMA2P24043 3122 aaKnown RBP22.63■■□□□ 1.21
MRPL40-201ENST00000333130 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.63■■□□□ 1.21
MRPL40-201ENST00000333130 H0YCG3 227 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 TLL1O43897 1013 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 SKIP12755 728 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PLS3P13797 630 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 MAPK6Q16659 721 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 TMEM132AQ24JP5 1023 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 LONRF3Q496Y0 759 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 TPRNQ4KMQ1 711 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 TWF2Q6IBS0 349 aaKnown RBP22.63■■□□□ 1.21
MRPL40-201ENST00000333130 CEP57L1Q8IYX8 460 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 BSNDQ8WZ55 320 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 REEP2Q9BRK0 252 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PARVGQ9HBI0 331 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 LMBRD1Q9NUN5 540 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 SERTAD1Q9UHV2 236 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 PCDHA11Q9Y5I1 949 aa22.63■■□□□ 1.21
MRPL40-201ENST00000333130 MYMKA6NI61 221 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 UPP2O95045 317 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 ZNF202O95125 648 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 GJB5O95377 273 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 SCP2P22307 547 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 SARSP49591 514 aaKnown RBP22.62■■□□□ 1.21
MRPL40-201ENST00000333130 MBTD1Q05BQ5 628 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 CNNM4Q6P4Q7 775 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 NOTUMQ6P988 496 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 NPAS4Q8IUM7 802 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 TOP1MTQ969P6 601 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 CCDC51Q96ER9 411 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 ZHX3Q9H4I2 956 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 MINDY3Q9H8M7 445 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 PCDHB7Q9Y5E2 793 aa22.62■■□□□ 1.21
MRPL40-201ENST00000333130 LIG1P18858 919 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 ABCD1P33897 745 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 NPTX2P47972 431 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 RAB27AP51159 221 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 GIT2Q14161 759 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 FAM117BQ6P1L5 589 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 SLC17A8Q8NDX2 589 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 SPIRE2Q8WWL2 714 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 LINC01599Q8WXQ3 324 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 DDX12PQ92771 950 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 DNAJC19Q96DA6 116 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 CCDC34Q96HJ3 373 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 YME1L1Q96TA2 773 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 POLD4Q9HCU8 107 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 INSL6Q9Y581 213 aa22.61■■□□□ 1.21
MRPL40-201ENST00000333130 NPHP3-ACAD11A0A0J9YXS1 232 aa22.6■■□□□ 1.21
MRPL40-201ENST00000333130 GRXCR1A8MXD5 290 aa22.6■■□□□ 1.21
MRPL40-201ENST00000333130 GOLGA6L22H0YM25 854 aa22.6■■□□□ 1.21
MRPL40-201ENST00000333130 K7ERI5 159 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms