RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 POLR2MP0CAP2 368 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 MUTP22033 750 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
BRCC3-201ENST00000330045 ARHGAP44Q17R89 818 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 ODF2Q5BJF6 829 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 AGBL2Q5U5Z8 902 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 KAT2BQ92831 832 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 ARHGEF26Q96DR7 871 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 THAP2Q9H0W7 228 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 CARD9Q9H257 536 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 PPANQ9NQ55 473 aaKnown RBP16.64■□□□□ 0.25
BRCC3-201ENST00000330045 KCND2Q9NZV8 630 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 SLC12A6Q9UHW9 1150 aa16.64■□□□□ 0.25
BRCC3-201ENST00000330045 ANKRD62A6NC57 917 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 PTENP60484 403 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 UBXN2AP68543 259 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
BRCC3-201ENST00000330045 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 NAP1L3Q99457 506 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-201ENST00000330045 RAB17Q9H0T7 212 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 TAS2R14Q9NYV8 317 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 WRAP73Q9P2S5 460 aaPredicted RBP16.63■□□□□ 0.25
BRCC3-201ENST00000330045 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 DAAM1Q9Y4D1 1078 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 EXOC3O60645 756 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 BFSP1Q12934 665 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 PPP2R5EQ16537 467 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 PHLDB3Q6NSJ2 640 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 YTHDF3Q7Z739 585 aaKnown RBP16.63■□□□□ 0.25
BRCC3-201ENST00000330045 SYCP3Q8IZU3 236 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 RDH13Q8NBN7 331 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 TRIM51Q9BSJ1 452 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 TRIM31Q9BZY9 425 aa16.63■□□□□ 0.25
BRCC3-201ENST00000330045 ENTPD3O75355 529 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 ECE1P42892 770 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 TGFB2P61812 414 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 CEP55Q53EZ4 464 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 ICE2Q659A1 982 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 CSRNP1Q96S65 589 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 ZNF577Q9BSK1 485 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 UNC45AQ9H3U1 944 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 ZNRF3Q9ULT6 936 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 SYNPO2Q9UMS6 1093 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 NOVA2Q9UNW9 492 aaKnown RBP16.62■□□□□ 0.25
BRCC3-201ENST00000330045 GOLGA6L10A0A0M3HER8 536 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 FAM170AA1A519 330 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 FOXN3O00409 490 aaPredicted RBP16.62■□□□□ 0.25
BRCC3-201ENST00000330045 PPP2R2AP63151 447 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 DR1Q01658 176 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 KIF22Q14807 665 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 ADAT2Q7Z6V5 191 aaKnown RBP16.62■□□□□ 0.25
BRCC3-201ENST00000330045 PALB2Q86YC2 1186 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 SLC9A9Q8IVB4 645 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 HOOK2Q96ED9 719 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 FMO2Q99518 471 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 WDR11Q9BZH6 1224 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 VEZTQ9HBM0 779 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 GGA2Q9UJY4 613 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 PSME4Q14997 1843 aa16.62■□□□□ 0.25
BRCC3-201ENST00000330045 GMNCA6NCL1 334 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 LRRN2O75325 713 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 BCRP11274 1271 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 GUCY2CP25092 1073 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 MMS22LQ6ZRQ5 1243 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ATP8B4Q8TF62 1192 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 AGPAT1Q99943 283 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 EHMT1Q9H9B1 1298 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ARHGEF10LQ9HCE6 1279 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
BRCC3-201ENST00000330045 COG5Q9UP83 839 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 CAPN7Q9Y6W3 813 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 COL2A1P02458 1487 aaPredicted RBP16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ARHGEF35A5YM69 484 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 PPFIA2O75334 1257 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ARP10275 920 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 RFX1P22670 979 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 PPARDQ03181 441 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
BRCC3-201ENST00000330045 DLGAP5Q15398 846 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 CLUL1Q15846 466 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 KRT71Q3SY84 523 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 FBXW10Q5XX13 1052 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 DUPD1Q68J44 220 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 RHOT2Q8IXI1 618 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 BANK1Q8NDB2 785 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ERP44Q9BS26 406 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 STRA6Q9BX79 667 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 ATP8A1Q9Y2Q0 1164 aa16.61■□□□□ 0.25
BRCC3-201ENST00000330045 CNTNAP1P78357 1384 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 HIP1RO75146 1068 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 KRT13P13646 458 aa16.6■□□□□ 0.25
BRCC3-201ENST00000330045 TMOD1P28289 359 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms