RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ABCD1P33897 745 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 RFC5P40937 340 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 VAMP7P51809 220 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 NCBP1Q09161 790 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 KIF5AQ12840 1032 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CELF3Q5SZQ8 465 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 FBXO16Q8IX29 292 aaPredicted RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 ZSWIM2Q8NEG5 633 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 NAPGQ99747 312 aaPredicted RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 IFIH1Q9BYX4 1025 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 TSGA10Q9BZW7 698 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 ARHGAP28Q9P2N2 729 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 RBAK-RBAKDNI3L0D1 243 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 CNGA1P29973 690 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 ADSSP30520 456 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 GCLCP48506 637 aaPredicted RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 ARID5AQ03989 594 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 KLHL30Q0D2K2 578 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 NAA30Q147X3 362 aaPredicted RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 TARBP2Q15633 366 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 CCDC62Q6P9F0 684 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 TMEM143Q96AN5 459 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 GPR20Q99678 358 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 INTS2Q9H0H0 1204 aaKnown RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 AZI2Q9H6S1 392 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 MORF4L1Q9UBU8 362 aa16.28■□□□□ 0.2
TPM3-205ENST00000328159 AJAP1Q9UKB5 411 aaPredicted RBP16.28■□□□□ 0.2
TPM3-205ENST00000328159 GOLGA8IPA6NC78 632 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 GOLGA8JA6NMD2 632 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.2
TPM3-205ENST00000328159 LGR5O75473 907 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 ADRB2P07550 413 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 MAGEA1P43355 309 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 JAM2P57087 298 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 DLG4P78352 724 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.2
TPM3-205ENST00000328159 GFPT1Q06210 699 aaPredicted RBP16.27■□□□□ 0.2
TPM3-205ENST00000328159 SPRYD7Q5W111 196 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 SLC39A4Q6P5W5 647 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 GJB7Q6PEY0 223 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 IRF2BP2Q7Z5L9 587 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 LRRN4CLQ8ND94 238 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 ASAP3Q8TDY4 903 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 SLC7A3Q8WY07 619 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 FAM167AQ96KS9 214 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 CARD6Q9BX69 1037 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 SIP14410 1827 aa16.27■□□□□ 0.2
TPM3-205ENST00000328159 EMSYQ7Z589 1322 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 ARL2P36404 184 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 MCCD1P59942 119 aaPredicted RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 TAS1R3Q7RTX0 852 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 DHX37Q8IY37 1157 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 MNS1Q8NEH6 495 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 ANKRD7Q92527 254 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 PPME1Q9Y570 386 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 BZW2Q9Y6E2 419 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 P4HA2O15460 535 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 PJA2O43164 708 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 ZBTB48P10074 688 aaPredicted RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 TXNP10599 105 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 SCP2P22307 547 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 GLRA2P23416 452 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 NAMPTP43490 491 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 PPP3CAQ08209 521 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 TUBB2AQ13885 445 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 TTLL4Q14679 1199 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 ENOX2Q16206 610 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 HSDL1Q3SXM5 330 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 BRDTQ58F21 947 aaPredicted RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 ARMCX2Q7L311 632 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 CBWD2Q8IUF1 395 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 TXLNBQ8N3L3 684 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 GLG1Q92896 1179 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 KCNN1Q92952 543 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 SAAL1Q96ER3 474 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 SPATA33Q96N06 139 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 TUBB2BQ9BVA1 445 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.26■□□□□ 0.19
TPM3-205ENST00000328159 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
TPM3-205ENST00000328159 V9GYY5 206 aaPredicted RBP16.26■□□□□ 0.19
TPM3-205ENST00000328159 HNRNPDLO14979 420 aaKnown RBP16.25■□□□□ 0.19
TPM3-205ENST00000328159 ADORA2AP29274 412 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 PRKCIP41743 596 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 SLC18A3Q16572 532 aa16.25■□□□□ 0.19
TPM3-205ENST00000328159 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms