RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PHF24Q9UPV7 400 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 AKT3Q9Y243 479 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 TRIP12Q14669 1992 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 CYP2C9P11712 490 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 EFNA5P52803 228 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 POU5F1BQ06416 359 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 RUFY4Q6ZNE9 571 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 ZC3H3Q8IXZ2 948 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 CSGALNACT2Q8N6G5 542 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 RNF149Q8NC42 400 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 DEFB118Q96PH6 123 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 NFKBIZQ9BYH8 718 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 RNF208Q9H0X6 261 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 THAP9Q9H5L6 903 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 SAMSN1Q9NSI8 373 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 OGDHLQ9ULD0 1010 aa11.26□□□□□ -0.61
VIPAS39-201ENST00000327028 DNM1LO00429 736 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 TREHO43280 583 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 GJB1P08034 283 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 NFIL3Q16649 462 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 TAS1R3Q7RTX0 852 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 SYCP3Q8IZU3 236 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 CCDC113Q9H0I3 377 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 CGNQ9P2M7 1197 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 GRIN2DO15399 1336 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 A0A1W2PQ45 241 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 A0A1W2PQY0 241 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 FGFR1OPO95684 399 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 PHKA2P46019 1235 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 SNRPFP62306 86 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 FAM47CQ5HY64 1035 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 GDF6Q6KF10 455 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 LRRC55Q6ZSA7 311 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 HS2ST1Q7LGA3 356 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF410Q86VK4 478 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 NLRP4Q96MN2 994 aa11.25□□□□□ -0.61
VIPAS39-201ENST00000327028 MYCP01106 439 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 VTNP04004 478 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 GPC3P51654 580 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 PTENP60484 403 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 CDC42EP1Q00587 391 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 STRN3Q13033 797 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 ITGA7Q13683 1181 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 SARM1Q6SZW1 724 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 CEP63Q96MT8 703 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 SRRTQ9BXP5 876 aaKnown RBP11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 FAM49AQ9H0Q0 323 aaPredicted RBP11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 IKZF4Q9H2S9 585 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 AGPAT3Q9NRZ7 376 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 K7ERI5 159 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 PIGRP01833 764 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 ATP1A3P13637 1013 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 SPAG1Q07617 926 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 C12orf56Q8IXR9 622 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 ZNF710Q8N1W2 664 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 SLC43A3Q8NBI5 491 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 TMEM174Q8WUU8 243 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 VTI1AQ96AJ9 217 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 CRISPLD2Q9H0B8 497 aa11.24□□□□□ -0.61
VIPAS39-201ENST00000327028 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 NR3C1P04150 777 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 RPLP2P05387 115 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 NR2F2P24468 414 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 MBTD1Q05BQ5 628 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 MYBPC2Q14324 1141 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 IRF2BP1Q8IU81 584 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 NME8Q8N427 588 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 SEZ6LQ9BYH1 1024 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 IFT122Q9HBG6 1241 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 STARD7Q9NQZ5 370 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 A0A087WZ62 844 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 KCNJ18B7U540 433 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 PRKCBP05771 671 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 EEF1GP26641 437 aaKnown RBP11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 KCNJ12Q14500 433 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 DNAJB3Q8WWF6 145 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 NLRP7Q8WX94 980 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 ADAMTS10Q9H324 1103 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
VIPAS39-201ENST00000327028 HNRNPDLO14979 420 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 CETN3O15182 167 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 SLC16A3O15427 465 aaKnown RBP11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 AP5Z1O43299 807 aa11.22□□□□□ -0.61
VIPAS39-201ENST00000327028 GPR32O75388 356 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms