RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 WWP1Q9H0M0 922 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 UBN1Q9NPG3 1134 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TRPC5Q9UL62 973 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ASCC3Q8N3C0 2202 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 TEX33O43247 280 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CHMP2AO43633 222 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 NCK2O43639 380 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PHF2O75151 1096 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 HOXC9P31274 260 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 MLH1P40692 756 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PIK3CAP42336 1068 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 PLS1Q14651 629 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 AENQ8WTP8 325 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 WARS2Q9UGM6 360 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 ADAMTS1Q9UHI8 967 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 SH3GLB1Q9Y371 365 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DOCK11Q5JSL3 2073 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 MFAP3P55082 362 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CEP55Q53EZ4 464 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 EDC3Q96F86 508 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 KRT38O76015 456 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DLATP10515 647 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 STX1BP61266 288 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 MORF4L2Q15014 288 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 THEMIS2Q5TEJ8 643 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 LRRC74BQ6ZQY2 392 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 FUKQ8N0W3 1084 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 DTX3LQ8TDB6 740 aa7.51□□□□□ -1.21
SMC1A-201ENST00000322213 LIMA1Q9UHB6 759 aaKnown RBP7.51□□□□□ -1.21
SMC1A-201ENST00000322213 CPDO75976 1380 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PALLDQ8WX93 1383 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TRAPPC3O43617 180 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 GSTT1P30711 240 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TRMT5Q32P41 509 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CCDC125Q86Z20 511 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 HIPK4Q8NE63 616 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CFAP36Q96G28 342 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 SAYSD1Q9NPB0 183 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 STX18Q9P2W9 335 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PRLRP16471 622 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 SKOR1P84550 965 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TFAP4Q01664 338 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 MPP4Q96JB8 637 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CCT7Q99832 543 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 NDEL1Q9GZM8 345 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 DDX47Q9H0S4 455 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 MMADHCQ9H3L0 296 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ATXN10Q9UBB4 475 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PPIP5K2O43314 1243 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 HMGB2P26583 209 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 BASP1P80723 227 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ORC2Q13416 577 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PPM1KQ8N3J5 372 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TNIP2Q8NFZ5 429 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 LENG1Q96BZ8 264 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TMBIM4Q9HC24 238 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 IRS4O14654 1257 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 P4HA2O15460 535 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CLPTM1O96005 669 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 NAB2Q15742 525 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 SHC4Q6S5L8 630 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 C16orf89Q6UX73 402 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 GPKOWQ92917 476 aaPredicted RBP eCLIP7.5□□□□□ -1.211e-6■□□□□ 10.4
SMC1A-201ENST00000322213 SERPINB12Q96P63 405 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PKD2L2Q9NZM6 624 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 AMACRQ9UHK6 382 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 IPO11Q9UI26 975 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 MID2Q9UJV3 735 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 GNGT2O14610 69 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 DACT3Q96B18 629 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 NSL1Q96IY1 281 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 NUP85Q9BW27 656 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TRABDQ9H4I3 376 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ATAD3AQ9NVI7 634 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 AIPL1Q9NZN9 384 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 MYO7BQ6PIF6 2116 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 C3P01024 1663 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PIK3C2BO00750 1634 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 K7ENM7 598 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ENO1P06733 434 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ZAP70P43403 619 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 HIF1AQ16665 826 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PAPD7Q5XG87 772 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CWF19L1Q69YN2 538 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 TTC17Q96AE7 1141 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 GIMAP4Q9NUV9 329 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 hCG_1984214I3L0E3 225 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 PRPF3O43395 683 aaKnown RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 DAB1O75553 588 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 CALB2P22676 271 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 LRRC14Q15048 493 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 SLC18A3Q16572 532 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 RAPH1Q70E73 1250 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF713Q8N859 430 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 USP38Q8NB14 1042 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
SMC1A-201ENST00000322213 BLOC1S6Q9UL45 172 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
SMC1A-201ENST00000322213 SEC16AO15027 2179 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms