RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 WRAP73Q9P2S5 460 aaPredicted RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 GOLGA6L10A0A0M3HER8 536 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 KIAA0391O15091 583 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 GH2P01242 217 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 HSPA6P17066 643 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TNFAIP3P21580 790 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 TMOD1P28289 359 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ALDH1B1P30837 517 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 USP8P40818 1118 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 CYP2J2P51589 502 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 GTF2A1P52655 376 aaPredicted RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 SMTNP53814 917 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 MAGOHP61326 146 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 IFT88Q13099 833 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 MAPK7Q13164 816 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 QPCTQ16769 361 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 PHLDB3Q6NSJ2 640 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 SLC30A10Q6XR72 485 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 ARMC9Q7Z3E5 817 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 RAPGEF5Q92565 580 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 MAGOHBQ96A72 148 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 CABS1Q96KC9 395 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 PSMD1Q99460 953 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 AGPAT1Q99943 283 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 WDR11Q9BZH6 1224 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 CNOT10Q9H9A5 744 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 DBNDD1Q9H9R9 158 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 DDX20Q9UHI6 824 aaKnown RBP9.42□□□□□ -0.9
CLK1-201ENST00000321356 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 PFASO15067 1338 aa9.42□□□□□ -0.9
CLK1-201ENST00000321356 G3V3G9 751 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 FOXN3O00409 490 aaPredicted RBP9.41□□□□□ -0.9
CLK1-201ENST00000321356 CHMP2AO43633 222 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 GAS7O60861 476 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 PHF2O75151 1096 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 ENTPD3O75355 529 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 MTA2O94776 668 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 PTGIRP43119 386 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 BYSLQ13895 437 aaKnown RBP9.41□□□□□ -0.9
CLK1-201ENST00000321356 KCTD19Q17RG1 926 aaPredicted RBP9.41□□□□□ -0.9
CLK1-201ENST00000321356 ODF2Q5BJF6 829 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 KIAA1755Q5JYT7 1200 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 ODR4Q5SWX8 454 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 DCAF8Q5TAQ9 597 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 JAMLQ86YT9 394 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 CCDC13Q8IYE1 715 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 DAW1Q8N136 415 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 BANK1Q8NDB2 785 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 GLG1Q92896 1179 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 PGM2Q96G03 612 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
CLK1-201ENST00000321356 GRHL1Q9NZI5 618 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLK1-201ENST00000321356 PCYOX1Q9UHG3 505 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 ALG6Q9Y672 507 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 SYNGAP1Q96PV0 1343 aa9.41□□□□□ -0.9
CLK1-201ENST00000321356 P4HA2O15460 535 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 EXOC3O60645 756 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 CAND2O75155 1236 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 RASSF9O75901 435 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 CFBP00751 764 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 VIL1P09327 827 aaKnown RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 POLR2MP0CAP2 368 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 ALAS1P13196 640 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 DRD4P21917 467 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 CHRNA3P32297 505 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 GBP1P32455 592 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 COPB2P35606 906 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 STAT2P52630 851 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 MCCD1P59942 119 aaPredicted RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 PRPF4BQ13523 1007 aaKnown RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 ARHGAP44Q17R89 818 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 EPC2Q52LR7 807 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 CEP55Q53EZ4 464 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 RNF187Q5TA31 235 aaPredicted RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 HOOK3Q86VS8 718 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 C12orf56Q8IXR9 622 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 PRELID2Q8N945 189 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 NEK9Q8TD19 979 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 IPO4Q8TEX9 1081 aaKnown RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 SLC20A1Q8WUM9 679 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 RPS6KC1Q96S38 1066 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 ZSWIM1Q9BR11 485 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 OSBPL7Q9BZF2 842 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 TRIM31Q9BZY9 425 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 UNC45AQ9H3U1 944 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 ACTR5Q9H9F9 607 aaPredicted RBP9.4□□□□□ -0.9
CLK1-201ENST00000321356 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 PCDHA3Q9Y5H8 950 aa9.4□□□□□ -0.9
CLK1-201ENST00000321356 H0YHG0 523 aa9.4□□□□□ -0.91
CLK1-201ENST00000321356 PMM2O15305 246 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms