RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CFAP36Q96G28 342 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 RUSC1Q9BVN2 902 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 PSAPP07602 524 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 MRPS9P82933 396 aaKnown RBP17.67■□□□□ 0.42
CLIP4-201ENST00000320081 LGSNQ5TDP6 509 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 RHPN2Q8IUC4 686 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 RHOT2Q8IXI1 618 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 RNF10Q8N5U6 811 aaKnown RBP17.67■□□□□ 0.42
CLIP4-201ENST00000320081 SALL1Q9NSC2 1324 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 PHF20L1A8MW92 1017 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 CCDC188H7C350 402 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 P4HA1P13674 534 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 SOX5P35711 763 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 TTC17Q96AE7 1141 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 INTS13Q9NVM9 706 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 ARHGAP20Q9P2F6 1191 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 RASA4BC9J798 803 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 RASA4O43374 803 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 STK10O94804 968 aaKnown RBP17.66■□□□□ 0.42
CLIP4-201ENST00000320081 CYP11B2P19099 503 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 PSMA2P25787 234 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 KCNK18Q7Z418 384 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 DBR1Q9UK59 544 aaKnown RBP17.66■□□□□ 0.42
CLIP4-201ENST00000320081 A0A0G2JND7 137 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 TMEM150BA6NC51 233 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 EYA4O95677 639 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 CYP2C19P33261 490 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 EFCAB13Q8IY85 973 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 ANAPC4Q9UJX5 808 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 IL9RQ01113 521 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 RFX8Q6ZV50 586 aa17.66■□□□□ 0.42
CLIP4-201ENST00000320081 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 TLR3O15455 904 aaKnown RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 FMO5P49326 533 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 SAMD7Q7Z3H4 446 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 TADA2BQ86TJ2 420 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 ZC3H18Q86VM9 953 aaKnown RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 DNAAF3Q8N9W5 541 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PYROXD1Q8WU10 500 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 OTUD5Q96G74 571 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 ANKRD36BP1Q96IX9 119 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 ZIM3Q96PE6 472 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PLAGL2Q9UPG8 496 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 SSX2IPQ9Y2D8 614 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PDS5AQ29RF7 1337 aaKnown RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 VWDEQ8N2E2 1590 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 MAP3K6O95382 1288 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 YWHABP31946 246 aaKnown RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PHBP35232 272 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 SOX10P56693 466 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 MUM1Q2TAK8 710 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 MDM1Q8TC05 714 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 RFFLQ8WZ73 363 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 MRPL47Q9HD33 250 aaKnown RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PCDHAC2Q9Y5I4 1007 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 OVOS2A0A0G2JMS6 1433 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 HMGB1P1B2RPK0 211 aaPredicted RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 CUL1Q13616 776 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 FAM160B1Q5W0V3 765 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 RPAP3Q9H6T3 665 aaPredicted RBP17.65■□□□□ 0.42
CLIP4-201ENST00000320081 PPLO60437 1756 aa17.65■□□□□ 0.42
CLIP4-201ENST00000320081 A6NJR5 290 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 POLRMTO00411 1230 aaKnown RBP17.64■□□□□ 0.42
CLIP4-201ENST00000320081 TMCO4Q5TGY1 634 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 KIAA0895Q8NCT3 520 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 SCYL1Q96KG9 808 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 KBTBD4Q9NVX7 518 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 PNMA2Q9UL42 364 aa17.64■□□□□ 0.42
CLIP4-201ENST00000320081 BRAFP15056 766 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 MSH2P43246 934 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 KCNJ6P48051 423 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 HERVK_113P62684 666 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 GABPAQ06546 454 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 SNCBQ16143 134 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 DALRD3Q5D0E6 543 aaKnown RBP17.64■□□□□ 0.41
CLIP4-201ENST00000320081 KRT39Q6A163 491 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 ARL8AQ96BM9 186 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 HPCAL4Q9UM19 191 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 SASH3O75995 380 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 PLS3P13797 630 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 H2AFXP16104 143 aaPredicted RBP17.64■□□□□ 0.41
CLIP4-201ENST00000320081 PMS2P54278 862 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 OR6B3Q8NGW1 331 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 ANKS1AQ92625 1134 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 POP1Q99575 1024 aaKnown RBP17.64■□□□□ 0.41
CLIP4-201ENST00000320081 MIS12Q9H081 205 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 POLR3FQ9H1D9 316 aaPredicted RBP17.64■□□□□ 0.41
CLIP4-201ENST00000320081 OSGEPQ9NPF4 335 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 MCF2LO15068 1137 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 SCP2P22307 547 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 KCNV2Q8TDN2 545 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 MAML1Q92585 1016 aa17.64■□□□□ 0.41
CLIP4-201ENST00000320081 PDXKO00764 312 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 GRAP2O75791 330 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 MTMR8Q96EF0 704 aa17.63■□□□□ 0.41
CLIP4-201ENST00000320081 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms