RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
SCAP-202ENST00000320017 SCFD2Q8WU76 684 aa16.13■□□□□ 0.17
SCAP-202ENST00000320017 MYLK2Q9H1R3 596 aa16.13■□□□□ 0.17
SCAP-202ENST00000320017 TMEM260Q9NX78 707 aa16.13■□□□□ 0.17
SCAP-202ENST00000320017 ARPP21Q9UBL0 812 aaPredicted RBP16.13■□□□□ 0.17
SCAP-202ENST00000320017 TBK1Q9UHD2 729 aa16.13■□□□□ 0.17
SCAP-202ENST00000320017 SIK3Q9Y2K2 1263 aa16.13■□□□□ 0.17
SCAP-202ENST00000320017 SUPT3HO75486 399 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 VHLP40337 213 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 MAN2A1Q16706 1144 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 DNAJC17Q9NVM6 304 aaKnown RBP16.12■□□□□ 0.17
SCAP-202ENST00000320017 PHF24Q9UPV7 400 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 MYH6P13533 1939 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 FRMPD2Q68DX3 1309 aaPredicted RBP16.12■□□□□ 0.17
SCAP-202ENST00000320017 CCDC188H7C350 402 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 ACSL3O95573 720 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 BPIFB4P59827 614 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 DR1Q01658 176 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 HS2ST1Q7LGA3 356 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 CABP7Q86V35 215 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 NAP1L3Q99457 506 aaPredicted RBP16.12■□□□□ 0.17
SCAP-202ENST00000320017 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
SCAP-202ENST00000320017 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
SCAP-202ENST00000320017 GH1P01241 217 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 SERPING1P05155 500 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 ASIC2Q16515 512 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 NAALADL2Q58DX5 795 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 ASRGL1Q7L266 308 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 IQCDQ96DY2 449 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 TCP11L1Q9NUJ3 509 aa16.12■□□□□ 0.17
SCAP-202ENST00000320017 WFS1O76024 890 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 HNRNPH3P31942 346 aaKnown RBP16.11■□□□□ 0.17
SCAP-202ENST00000320017 USP11P51784 963 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 ZNF211Q13398 564 aaPredicted RBP16.11■□□□□ 0.17
SCAP-202ENST00000320017 GRIK5Q16478 980 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 CNPY1Q3B7I2 92 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 CFAP157Q5JU67 520 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 FAM83BQ5T0W9 1011 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 STMN2Q93045 179 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 PGM2Q96G03 612 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 TBC1D10AQ9BXI6 508 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 PITPNM3Q9BZ71 974 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 ETNK2Q9NVF9 386 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 LRP6O75581 1613 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 SSU72P8A0A1W2PR75 194 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 OPHN1O60890 802 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 PFKFB3Q16875 520 aaPredicted RBP16.11■□□□□ 0.17
SCAP-202ENST00000320017 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAP-202ENST00000320017 ECHDC2Q86YB7 292 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 NELFCDQ8IXH7 590 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 AGGF1Q8N302 714 aaeCLIP16.11■□□□□ 0.17
SCAP-202ENST00000320017 BAP1Q92560 729 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 ANKRD2Q9GZV1 360 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 DENND2DQ9H6A0 471 aaPredicted RBP16.11■□□□□ 0.17
SCAP-202ENST00000320017 SUGT1Q9Y2Z0 365 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
SCAP-202ENST00000320017 MAGEA13PA6NCF6 341 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 RHOBTB3O94955 611 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 TJP3O95049 919 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 AFPP02771 609 aaKnown RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 LDHBP07195 334 aaKnown RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 PICALMQ13492 652 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 DOK7Q18PE1 504 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 NSUN4Q96CB9 384 aaKnown RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 MTRF1LQ9UGC7 380 aaKnown RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 CAPN9O14815 690 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 LCA5LO95447 670 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 RASSF2P50749 326 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 LRRC37BQ96QE4 947 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 KIAA1683Q9H0B3 1180 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 NKIRAS1Q9NYS0 192 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 KLRC4O43908 158 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 FGFR1OPO95684 399 aaKnown RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 SLC18A3Q16572 532 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 TNFRSF25Q93038 417 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 ZNF333Q96JL9 665 aa16.1■□□□□ 0.17
SCAP-202ENST00000320017 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
SCAP-202ENST00000320017 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
SCAP-202ENST00000320017 O00370 1275 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 CALM1P0DP23 149 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 CALM2P0DP24 149 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 CALM3P0DP25 149 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 GYS1P13807 737 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 SERPINB3P29508 390 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 MAP7Q14244 749 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
SCAP-202ENST00000320017 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 EIF1ADQ8N9N8 165 aaKnown RBP16.09■□□□□ 0.17
SCAP-202ENST00000320017 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 COA7Q96BR5 231 aa16.09■□□□□ 0.17
SCAP-202ENST00000320017 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms