RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CYP4F22Q6NT55 531 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 FAM43BQ6ZT52 329 aaPredicted RBP10.39□□□□□ -0.75
RPGR-201ENST00000318842 SRRM1Q8IYB3 904 aaKnown RBP10.39□□□□□ -0.75
RPGR-201ENST00000318842 HES6Q96HZ4 224 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 PIDD1Q9HB75 910 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 MTMR4Q9NYA4 1195 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 SAMD15Q9P1V8 674 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 SORBS3O60504 671 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 TOM1O60784 492 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 COMTP21964 271 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 TARSP26639 723 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 TM4SF1P30408 202 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 ABL2P42684 1182 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 GCLMP48507 274 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 AUHQ13825 339 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 QRICH1Q2TAL8 776 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 DUPD1Q68J44 220 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 ISLR2Q6UXK2 745 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 BZW1Q7L1Q6 419 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 NEDD1Q8NHV4 660 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 CCDC26Q8TAB7 109 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 CTNNBL1Q8WYA6 563 aaPredicted RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 DHX38Q92620 1227 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 C10orf88Q9H8K7 445 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 LUC7LQ9NQ29 371 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 WRAP73Q9P2S5 460 aaPredicted RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 ARAP2Q8WZ64 1704 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 KIAA1551Q9HCM1 1747 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 C6orf229H3BNL8 230 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 FTLP02792 175 aaPredicted RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 RHBDL3P58872 404 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 BIRC3Q13489 604 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 ZYXQ15942 572 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 CGB2Q6NT52 195 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 CCDC137Q6PK04 289 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 LRIG3Q6UXM1 1119 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 LMBR1Q8WVP7 490 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 ACSF2Q96CM8 615 aaPredicted RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 KLHL29Q96CT2 875 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 GPR88Q9GZN0 384 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 METTL5Q9NRN9 209 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 INTUQ9ULD6 942 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 C2orf71A6NGG8 1288 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 PPFIA2O75334 1257 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 CLSTN1O94985 981 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 BAG3O95817 575 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 SF3B3Q15393 1217 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 CNGA2Q16280 664 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 C16orf86Q6ZW13 317 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 MIGA2Q7L4E1 593 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 PBKQ96KB5 322 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 PABPC3Q9H361 631 aaKnown RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 MAGEF1Q9HAY2 307 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 UBE2TQ9NPD8 197 aaPredicted RBP10.38□□□□□ -0.75
RPGR-201ENST00000318842 CHST7Q9NS84 486 aa10.38□□□□□ -0.75
RPGR-201ENST00000318842 ANKRD36CQ5JPF3 1778 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 C5orf60A6NFR6 353 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 RASGRF2O14827 1237 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 SGPL1O95470 568 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 GYS1P13807 737 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 FAM186BQ8IYM0 893 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 TTC8Q8TAM2 541 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 PCDHB18PQ96TA0 734 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 RAB34Q9BZG1 259 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 TRIM6Q9C030 488 aaPredicted RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 RIOX1Q9H6W3 641 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 ACTR5Q9H9F9 607 aaPredicted RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 AP1G2O75843 785 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 CBX6O95503 412 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 GM2AP17900 193 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 TNFAIP3P21580 790 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 STAT1P42224 750 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 SUPT20HQ8NEM7 779 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 ARHGEF2Q92974 986 aaKnown RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 ANO3Q9BYT9 981 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 TOPORSQ9NS56 1045 aaPredicted RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 HAO1Q9UJM8 370 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 TTC7AQ9ULT0 858 aaPredicted RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 SLC12A4Q9UP95 1085 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 R3HDM2Q9Y2K5 976 aaKnown RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.37□□□□□ -0.75
RPGR-201ENST00000318842 NUMBLQ9Y6R0 609 aa10.37□□□□□ -0.75
RPGR-201ENST00000318842 DCCP43146 1447 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 RIPK2O43353 540 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 RTN2O75298 545 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 PCP11498 1178 aaKnown RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 VCAM1P19320 739 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 MMP13P45452 471 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 PTENP60484 403 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SATB1Q01826 763 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 MAP2K1Q02750 393 aaPredicted RBP10.36□□□□□ -0.75
RPGR-201ENST00000318842 MAPK7Q13164 816 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 DNAJC3Q13217 504 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 SGSM1Q2NKQ1 1148 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 GNPTABQ3T906 1256 aa10.36□□□□□ -0.75
RPGR-201ENST00000318842 KLF6Q99612 283 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms