RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 CNOT7Q9UIV1 285 aaKnown RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 ATMINO43313 823 aaPredicted RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 PLS3P13797 630 aa16.04■□□□□ 0.16
CLK4-201ENST00000316308 CAPN2P17655 700 aa16.04■□□□□ 0.16
CLK4-201ENST00000316308 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 TTC19Q6DKK2 380 aaPredicted RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 SEMA4DQ92854 862 aa16.04■□□□□ 0.16
CLK4-201ENST00000316308 CCDC127Q96BQ5 260 aa16.04■□□□□ 0.16
CLK4-201ENST00000316308 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
CLK4-201ENST00000316308 LARSQ9P2J5 1176 aaKnown RBP16.04■□□□□ 0.16
CLK4-201ENST00000316308 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 PFASO15067 1338 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 ADGRA3Q8IWK6 1321 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 GOLGA6BA6NDN3 693 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 PPP1R12BO60237 982 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 KRT14P02533 472 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 FERP16591 822 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 DNAJC21Q5F1R6 531 aaKnown RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 ARHGEF16Q5VV41 709 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 TAF3Q5VWG9 929 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 GDF3Q9NR23 364 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 TMEM59LQ9UK28 342 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 STXBP5LQ9Y2K9 1186 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 CTNND1O60716 968 aaKnown RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 USP8P40818 1118 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 VAMP7P51809 220 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 ZNF280AP59817 542 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 ERVK-9P63128 1117 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 MAP2K1Q02750 393 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 ZNF211Q13398 564 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 ZNF526Q8TF50 670 aaPredicted RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 LPAR1Q92633 364 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 CELF4Q9BZC1 486 aaKnown RBP16.03■□□□□ 0.16
CLK4-201ENST00000316308 KCND2Q9NZV8 630 aa16.03■□□□□ 0.16
CLK4-201ENST00000316308 MCM3P25205 808 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 SLC39A4Q6P5W5 647 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 SH2D3CQ8N5H7 860 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 WRNIP1Q96S55 665 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 TMEM117Q9H0C3 514 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 NOC2LQ9Y3T9 749 aaKnown RBP16.02■□□□□ 0.16
CLK4-201ENST00000316308 KIAA1217Q5T5P2 1943 aa16.02■□□□□ 0.16
CLK4-201ENST00000316308 BTNL10A8MVZ5 291 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 MUTP22033 750 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 ZSCAN26Q16670 478 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 KCTD16Q68DU8 428 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 SNRNP48Q6IEG0 339 aaKnown RBP16.02■□□□□ 0.15
CLK4-201ENST00000316308 CCDC70Q6NSX1 233 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 KCTD17Q8N5Z5 321 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 ZIM3Q96PE6 472 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 PCDHB18PQ96TA0 734 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 MED4Q9NPJ6 270 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 TSKSQ9UJT2 592 aa16.02■□□□□ 0.15
CLK4-201ENST00000316308 SGPL1O95470 568 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 ECHS1P30084 290 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 FLT3P36888 993 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 NPTX2P47972 431 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 MARCKSL1P49006 195 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TTMPQ5BVD1 217 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
CLK4-201ENST00000316308 SLFN11Q7Z7L1 901 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 SLC9A9Q8IVB4 645 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TXLNBQ8N3L3 684 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 PIK3R5Q8WYR1 880 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TAF4BQ92750 862 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 KREMEN1Q96MU8 473 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 AMACRQ9UHK6 382 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 DBR1Q9UK59 544 aaKnown RBP16.01■□□□□ 0.15
CLK4-201ENST00000316308 ZNF541Q9H0D2 1346 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 NR3C2P08235 984 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 EPHB4P54760 987 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 BACE1P56817 501 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 GTF2BQ00403 316 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 GHRHRQ02643 423 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 PPP2R5AQ15172 486 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 LLGL1Q15334 1064 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 EPC2Q52LR7 807 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 LMBRD2Q68DH5 695 aaPredicted RBP16.01■□□□□ 0.15
CLK4-201ENST00000316308 SCARA3Q6AZY7 606 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 SCFD2Q8WU76 684 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 DHX38Q92620 1227 aaKnown RBP16.01■□□□□ 0.15
CLK4-201ENST00000316308 CCDC43Q96MW1 224 aaKnown RBP16.01■□□□□ 0.15
CLK4-201ENST00000316308 R3HDMLQ9H3Y0 253 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 TMOD4Q9NZQ9 345 aa16.01■□□□□ 0.15
CLK4-201ENST00000316308 PTPRAP18433 802 aa16■□□□□ 0.15
CLK4-201ENST00000316308 SLC47A2Q86VL8 602 aa16■□□□□ 0.15
CLK4-201ENST00000316308 XXYLT1Q8NBI6 393 aa16■□□□□ 0.15
CLK4-201ENST00000316308 TMEM161BQ8NDZ6 487 aa16■□□□□ 0.15
CLK4-201ENST00000316308 REPS2Q8NFH8 660 aa16■□□□□ 0.15
CLK4-201ENST00000316308 ALG3Q92685 438 aa16■□□□□ 0.15
CLK4-201ENST00000316308 BTBD6Q96KE9 485 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms