RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 CNBD2Q96M20 576 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 NKX1-2Q9UD57 310 aaPredicted RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 CRB1P82279 1406 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PGM3O95394 542 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 EEF1DP29692 281 aaKnown RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 CDK17Q00537 523 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 HIC1Q14526 733 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 CNGA2Q16280 664 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 TRABDQ9H4I3 376 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 SAYSD1Q9NPB0 183 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PCMTD2Q9NV79 361 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 NPHP3-ACAD11A0A0J9YXS1 232 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PYGMP11217 842 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PDE6AP16499 860 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 LRRC63Q05C16 580 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 ERGIC2Q96RQ1 377 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 ETNK2Q9NVF9 386 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 AIPL1Q9NZN9 384 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 MCF2P10911 925 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PLS1Q14651 629 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 DDHD1Q8NEL9 900 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PGM2Q96G03 612 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
EBF1-201ENST00000313708 SLC12A6Q9UHW9 1150 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 WDR37Q9Y2I8 494 aa13.16□□□□□ -0.3
EBF1-201ENST00000313708 CPDO75976 1380 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 ATP1A4Q13733 1029 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 INPP5DQ92835 1189 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 RIC8AQ9NPQ8 531 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 NR2F2P24468 414 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 ATP2C1P98194 919 aaPredicted RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 NR1H3Q13133 447 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 LIN52Q52LA3 116 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 ZBTB8BQ8NAP8 495 aaPredicted RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 LARP4BQ92615 738 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 KIF1BO60333 1816 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 WDR19Q8NEZ3 1342 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 AFPP02771 609 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 STXBP4Q6ZWJ1 553 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 SIX5Q8N196 739 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 MRPL46Q9H2W6 279 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 EURLQ9NYK6 297 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 PLEKHA8P1O95397 391 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 FITM2Q8N6M3 262 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 C1orf131Q8NDD1 294 aaKnown RBP13.15□□□□□ -0.3
EBF1-201ENST00000313708 ZNF212Q9UDV6 495 aa13.15□□□□□ -0.3
EBF1-201ENST00000313708 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 LCA5LO95447 670 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 MT-ND3P03897 115 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 DDB1Q16531 1140 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 ACTRT1Q8TDG2 376 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 METTL14Q9HCE5 456 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 HEY2Q9UBP5 337 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 TRMT112Q9UI30 125 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 IQCA1LA6NCM1 817 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 CDH16O75309 829 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 STAT2P52630 851 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 NOP14P78316 857 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 SGSM1Q2NKQ1 1148 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 SLC25A41Q8N5S1 370 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 SERPINB12Q96P63 405 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 CCT7Q99832 543 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 SPHKAPQ2M3C7 1700 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 A0A087X0B3 334 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 A6NHS1 94 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 PHF2O75151 1096 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 FAM13AO94988 1023 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 BAG3O95817 575 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 TPBGLP0DKB5 382 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 DLATP10515 647 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 GSTA3Q16772 222 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 IYDQ6PHW0 289 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 ZNF507Q8TCN5 953 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 DNAJC1Q96KC8 554 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
EBF1-201ENST00000313708 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
EBF1-201ENST00000313708 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms