RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 R3HCC1Q9Y3T6 440 aaKnown RBP12.15□□□□□ -0.46
TRIM59-201ENST00000309784 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 MYCP01106 439 aaPredicted RBP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 KLRC1P26715 233 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 USP8P40818 1118 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 FLT3LGP49771 235 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 BEX3Q00994 111 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 BMT2Q1RMZ1 405 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 GBP6Q6ZN66 633 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 NLRP7Q8WX94 980 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 SPC25Q9HBM1 224 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 GCNT4Q9P109 453 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 MYH11P35749 1972 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 CSDE1O75534 798 aaKnown RBP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 GLRA2P23416 452 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 TFDP1Q14186 410 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 ABHD10Q9NUJ1 306 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 PPFIA4O75335 1185 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 TNNT1P13805 278 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 CLCN1P35523 988 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 SLC26A2P50443 739 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 TMEM62Q0P6H9 643 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 ARHGAP29Q52LW3 1261 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 PLPPR4Q7Z2D5 763 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 USP37Q86T82 979 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 TRIM59Q8IWR1 403 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
TRIM59-201ENST00000309784 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
TRIM59-201ENST00000309784 CCP110O43303 1012 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 AKR1B10O60218 316 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 STX10O60499 249 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 TNNI1P19237 187 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 GCLMP48507 274 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 OSTNP61366 133 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 MTF1Q14872 753 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 MAPK6Q16659 721 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 CYP26C1Q6V0L0 522 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 CDR2LQ86X02 465 aaPredicted RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 PPTC7Q8NI37 304 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 FIZ1Q96SL8 496 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 DHX33Q9H6R0 707 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 LZTFL1Q9NQ48 299 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 SEPT11Q9NVA2 429 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ITIH6Q6UXX5 1313 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 FAM170AA1A519 330 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ANKRD63C9JTQ0 380 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 SLC16A3O15427 465 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 NAMPTP43490 491 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 GTF2BQ00403 316 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 APBA1Q02410 837 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 BIRC3Q13489 604 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 IER5Q5VY09 327 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 KIAA1328Q86T90 577 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 CCDC42Q96M95 316 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 USP27XA6NNY8 438 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 FAM155AB1AL88 458 aaPredicted RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ACTN1P12814 892 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ACOT2P49753 483 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 NCKAP1LP55160 1127 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 MYL7Q01449 175 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 SP3Q02447 781 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 CBWD2Q8IUF1 395 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
TRIM59-201ENST00000309784 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 FLRT1Q9NZU1 646 aa12.13□□□□□ -0.47
TRIM59-201ENST00000309784 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
TRIM59-201ENST00000309784 MAFO75444 373 aaPredicted RBP12.12□□□□□ -0.47
TRIM59-201ENST00000309784 STBD1O95210 358 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 VTNP04004 478 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 SLC9A1P19634 815 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 LAMTOR4Q0VGL1 99 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 MXD4Q14582 209 aaPredicted RBP12.12□□□□□ -0.47
TRIM59-201ENST00000309784 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 PANX2Q96RD6 677 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 ADGRA3Q8IWK6 1321 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 ZMYM2Q9UBW7 1377 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 CCDC175P0C221 793 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 VAMP7P51809 220 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 ZBED6P86452 979 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 BFSP1Q12934 665 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
TRIM59-201ENST00000309784 CAPSQ13938 189 aa12.12□□□□□ -0.47
TRIM59-201ENST00000309784 SNRNP35Q16560 246 aaKnown RBP12.12□□□□□ -0.47
TRIM59-201ENST00000309784 KIAA0753Q2KHM9 967 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms