RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TSGA10Q9BZW7 698 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 ADGRA3Q8IWK6 1321 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 LRRC37A2A6NM11 1700 aa23.19■■□□□ 1.3
ATG4D-201ENST00000309469 ARID2Q68CP9 1835 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 H0YCG3 227 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 RRP9O43818 475 aaKnown RBP23.18■■□□□ 1.3
ATG4D-201ENST00000309469 ADSSP30520 456 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 ARID5AQ03989 594 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 KLHL30Q0D2K2 578 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 CELF3Q5SZQ8 465 aaKnown RBP23.18■■□□□ 1.3
ATG4D-201ENST00000309469 EHBP1Q8NDI1 1231 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 BRI3BPQ8WY22 251 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 CEP89Q96ST8 783 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 NAPGQ99747 312 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-201ENST00000309469 RBAK-RBAKDNI3L0D1 243 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 MYL7Q01449 175 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 GFPT1Q06210 699 aaPredicted RBP23.18■■□□□ 1.3
ATG4D-201ENST00000309469 IRF2BP2Q7Z5L9 587 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 ANKRD23Q86SG2 305 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 C2orf69Q8N8R5 385 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 LRRN4CLQ8ND94 238 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 ZSWIM2Q8NEG5 633 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 CARD6Q9BX69 1037 aa23.18■■□□□ 1.3
ATG4D-201ENST00000309469 ABCD1P33897 745 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 MAGEA1P43355 309 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 JAM2P57087 298 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 DLG4P78352 724 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 TARBP2Q15633 366 aaKnown RBP23.17■■□□□ 1.3
ATG4D-201ENST00000309469 IQCEQ6IPM2 695 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 FBXO16Q8IX29 292 aaPredicted RBP23.17■■□□□ 1.3
ATG4D-201ENST00000309469 ANKRD13CQ8N6S4 541 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 SLC7A3Q8WY07 619 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 TMEM143Q96AN5 459 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 ARHGAP28Q9P2N2 729 aa23.17■■□□□ 1.3
ATG4D-201ENST00000309469 AJAP1Q9UKB5 411 aaPredicted RBP23.17■■□□□ 1.3
ATG4D-201ENST00000309469 ASB14A6NK59 587 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 RFC5P40937 340 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 CCDC62Q6P9F0 684 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 GJB7Q6PEY0 223 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 MNS1Q8NEH6 495 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 GPR20Q99678 358 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 INTS2Q9H0H0 1204 aaKnown RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 AZI2Q9H6S1 392 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 DUSP10Q9Y6W6 482 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 V9GYY5 206 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 GOLGA8IPA6NC78 632 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 GOLGA8JA6NMD2 632 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 ARL2P36404 184 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 MCCD1P59942 119 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 TUBB2AQ13885 445 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 HSP90AA2PQ14568 343 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 SLC39A4Q6P5W5 647 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 TUBB2BQ9BVA1 445 aa23.16■■□□□ 1.3
ATG4D-201ENST00000309469 BZW2Q9Y6E2 419 aaKnown RBP23.16■■□□□ 1.3
ATG4D-201ENST00000309469 CELF2O95319 508 aaKnown RBP23.15■■□□□ 1.3
ATG4D-201ENST00000309469 GCLCP48506 637 aaPredicted RBP23.15■■□□□ 1.3
ATG4D-201ENST00000309469 HSDL1Q3SXM5 330 aa23.15■■□□□ 1.3
ATG4D-201ENST00000309469 C1orf220Q5T0J3 134 aa23.15■■□□□ 1.3
ATG4D-201ENST00000309469 TAS1R3Q7RTX0 852 aa23.15■■□□□ 1.3
ATG4D-201ENST00000309469 DHX37Q8IY37 1157 aaKnown RBP23.15■■□□□ 1.3
ATG4D-201ENST00000309469 EMSYQ7Z589 1322 aa23.15■■□□□ 1.3
ATG4D-201ENST00000309469 NOP56O00567 594 aaKnown RBP23.14■■□□□ 1.3
ATG4D-201ENST00000309469 P4HA2O15460 535 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 N4BP1O75113 896 aaKnown RBP23.14■■□□□ 1.3
ATG4D-201ENST00000309469 PPP3CAQ08209 521 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 ENOX2Q16206 610 aaKnown RBP23.14■■□□□ 1.3
ATG4D-201ENST00000309469 SNRNP35Q16560 246 aaKnown RBP23.14■■□□□ 1.3
ATG4D-201ENST00000309469 SLC18A3Q16572 532 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 SPRYD7Q5W111 196 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 TXLNBQ8N3L3 684 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 PLEKHO2Q8TD55 490 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 ASAP3Q8TDY4 903 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 KCNN1Q92952 543 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 FAM167AQ96KS9 214 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 MORF4L1Q9UBU8 362 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 CDC23Q9UJX2 597 aa23.14■■□□□ 1.3
ATG4D-201ENST00000309469 PJA2O43164 708 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 LGR5O75473 907 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 ADRB2P07550 413 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 TXNP10599 105 aaKnown RBP23.14■■□□□ 1.29
ATG4D-201ENST00000309469 SCP2P22307 547 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 GLRA2P23416 452 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 ZNF792Q3KQV3 632 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 CBWD2Q8IUF1 395 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 GLG1Q92896 1179 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 SECISBP2LQ93073 1101 aaKnown RBP23.14■■□□□ 1.29
ATG4D-201ENST00000309469 SAAL1Q96ER3 474 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 STK33Q9BYT3 514 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 PDCL3Q9H2J4 239 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 DNAJC12Q9UKB3 198 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 DAAM1Q9Y4D1 1078 aa23.14■■□□□ 1.29
ATG4D-201ENST00000309469 MACROD2A1Z1Q3 448 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 HNRNPDLO14979 420 aaKnown RBP23.13■■□□□ 1.29
ATG4D-201ENST00000309469 PRKCIP41743 596 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 NAMPTP43490 491 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 PTK2Q05397 1052 aa23.13■■□□□ 1.29
ATG4D-201ENST00000309469 CETN1Q12798 172 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms