RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 C7orf61Q8IZ16 206 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 C3orf58Q8NDZ4 430 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 TRIB2Q92519 343 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 RILPL2Q969X0 211 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 GPATCH3Q96I76 525 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 SIGLEC10Q96LC7 697 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 LSG1Q9H089 658 aaKnown RBP5.67□□□□□ -1.5
CKS1B-201ENST00000308987 DNAJC18Q9H819 358 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 TXNRD2Q9NNW7 524 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 MTMR10Q9NXD2 777 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 USP25Q9UHP3 1055 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 DENND2AQ9ULE3 1009 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 PALD1Q9ULE6 856 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 SNX14Q9Y5W7 946 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 IRAK3Q9Y616 596 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 MCM3APO60318 1980 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 MROH7-TTC4A0A0A0MT08 1334 aa5.67□□□□□ -1.5
CKS1B-201ENST00000308987 BAZ2AQ9UIF9 1905 aaKnown RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 SOWAHDA6NJG2 315 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 STX6O43752 255 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 SURF6O75683 361 aaKnown RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 F13A1P00488 732 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 COL6A1P12109 1028 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 PDCP20941 246 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 HMGCS2P54868 508 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 ATP2B2Q01814 1243 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 EGR3Q06889 387 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 CCL14Q16627 93 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 VMACQ2NL98 169 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 SPATS1Q496A3 300 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 NECAB2Q7Z6G3 386 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 ZSCAN29Q8IWY8 852 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 DEFB123Q8N688 67 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 SMCR8Q8TEV9 937 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 PIBF1Q8WXW3 757 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 USP6NLQ92738 828 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 NSUN4Q96CB9 384 aaKnown RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 DPH2Q9BQC3 489 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 ASCC2Q9H1I8 757 aaPredicted RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 COPRSQ9NQ92 184 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 ABCF2Q9UG63 623 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 OGDHLQ9ULD0 1010 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 SMC3Q9UQE7 1217 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 R3HCC1Q9Y3T6 440 aaKnown RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 ELP1O95163 1332 aa5.66□□□□□ -1.5
CKS1B-201ENST00000308987 PDS5AQ29RF7 1337 aaKnown RBP5.66□□□□□ -1.5
CKS1B-201ENST00000308987 GBF1Q92538 1859 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 A0A1B0GUL7 405 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 SLC22A31A6NKX4 558 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 GOLGA6L6A8MZA4 724 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CAVIN2O95810 425 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 HMGCRP04035 888 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PTMAP06454 111 aaKnown RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CYP2B6P20813 491 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 SYT1P21579 422 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PSMA5P28066 241 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CCND3P30281 292 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 IL15P40933 162 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CACNB2Q08289 660 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PDE4CQ08493 712 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 TFCP2Q12800 502 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PUM1Q14671 1186 aaKnown RBP eCLIP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 SNX17Q15036 470 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 ANKRD1Q15327 319 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 LRRC26Q2I0M4 334 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 LRIT3Q3SXY7 679 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 ADGRA1Q86SQ6 560 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 DZIP1Q86YF9 867 aaKnown RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 RETREG2Q8NC44 543 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 COA7Q96BR5 231 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 EVI5LQ96CN4 794 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 Q96M66 194 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 GUCD1Q96NT3 240 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 P2RX7Q99572 595 aaKnown RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 FUCA2Q9BTY2 467 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 OSBPL5Q9H0X9 879 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PORCNQ9H237 461 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.65□□□□□ -1.5
CKS1B-201ENST00000308987 ECHDC1Q9NTX5 307 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 SPTLC3Q9NUV7 552 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 MORF4L1Q9UBU8 362 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 DUSP13Q9UII6 198 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 GPR160Q9UJ42 338 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 PPM1HQ9ULR3 514 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 CYP46A1Q9Y6A2 500 aa5.65□□□□□ -1.5
CKS1B-201ENST00000308987 RPTORQ8N122 1335 aa5.65□□□□□ -1.51
CKS1B-201ENST00000308987 TRIOO75962 3097 aa5.65□□□□□ -1.51
CKS1B-201ENST00000308987 A0A0G2JMZ2 1700 aa5.65□□□□□ -1.51
CKS1B-201ENST00000308987 NAV1Q8NEY1 1877 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 UQCRHLA0A096LP55 91 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 SRGAP3O43295 1099 aa5.64□□□□□ -1.51
CKS1B-201ENST00000308987 CNMDO75829 334 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms