RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 TAS1R3Q7RTX0 852 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 MAP4K3Q8IVH8 894 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 XXYLT1Q8NBI6 393 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 NOA1Q8NC60 698 aaKnown RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 SPIRE2Q8WWL2 714 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 KIFAP3Q92845 792 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 OPTNQ96CV9 577 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 MMS19Q96T76 1030 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 PCYT2Q99447 389 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP47-201ENST00000305481 PARD6BQ9BYG5 372 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 INTS2Q9H0H0 1204 aaKnown RBP7.14□□□□□ -1.27
USP47-201ENST00000305481 ANKZF1Q9H8Y5 726 aa7.14□□□□□ -1.27
USP47-201ENST00000305481 GSTTP1A0A1W2PQM5 241 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DENND3A2RUS2 1198 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 GOLGA8IPA6NC78 632 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 GOLGA8JA6NMD2 632 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 POTEB2H3BUK9 544 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 FARP2O94887 1054 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 PGK2P07205 417 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 CNGA1P29973 690 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 VAMP7P51809 220 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 MYL7Q01449 175 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DMP1Q13316 513 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 TTLL12Q14166 644 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 NAB2Q15742 525 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 TRIM58Q8NG06 486 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 KMT5AQ9NQR1 393 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DNAJC12Q9UKB3 198 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 PCNTO95613 3336 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 F8VZ95 297 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 PDE2AO00408 941 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 BUB1O43683 1085 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DGAT1O75907 488 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 KLRC1P26715 233 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SNRPFP62306 86 aaKnown RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 XKR3Q5GH77 459 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 INTS8Q75QN2 995 aaKnown RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 CBWD2Q8IUF1 395 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 IPO4Q8TEX9 1081 aaKnown RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 STK33Q9BYT3 514 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 C17orf75Q9HAS0 396 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 JRKLQ9Y4A0 524 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 MYH10P35580 1976 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 EMSYQ7Z589 1322 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 LRRC37A2A6NM11 1700 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SPDYE4A6NLX3 237 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 VGLL3A8MV65 326 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DKC1O60832 514 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP47-201ENST00000305481 GFPT2O94808 682 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 GCLMP48507 274 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SMTNP53814 917 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DRAP1Q14919 205 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 KIAA0753Q2KHM9 967 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 MTERF2Q49AM1 385 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 LDLRAD1Q5T700 205 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 EEPD1Q7L9B9 569 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SAAL1Q96ER3 474 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SYT11Q9BT88 431 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 TAF1DQ9H5J8 278 aaPredicted RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 ZNF302Q9NR11 478 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 APEX2Q9UBZ4 518 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 KCNG1Q9UIX4 513 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 DDX41Q9UJV9 622 aaKnown RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 NAGPAQ9UK23 515 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 SNX12Q9UMY4 172 aa7.13□□□□□ -1.27
USP47-201ENST00000305481 BZW2Q9Y6E2 419 aaKnown RBP7.13□□□□□ -1.27
USP47-201ENST00000305481 DNAJC25-GNG10A0A024R161 153 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CTAGE15A4D2H0 777 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 DDX3XO00571 662 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP47-201ENST00000305481 MAPK13O15264 365 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 NCK2O43639 380 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 EVI5O60447 810 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 TACC1O75410 805 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 ZRANB2O95218 330 aaKnown RBP eCLIP7.12□□□□□ -1.27
USP47-201ENST00000305481 ARIH2O95376 493 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 OATP04181 439 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CTAGE8P0CG41 777 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 NF2P35240 595 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 SOX5P35711 763 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 RTP1P59025 263 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 SNRNP35Q16560 246 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 LY6KQ17RY6 165 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 EPC2Q52LR7 807 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CTAGE6Q86UF2 777 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CREG2Q8IUH2 290 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CTAGE4Q8IX94 777 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 RNF10Q8N5U6 811 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 MCPH1Q8NEM0 835 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 SLC30A5Q8TAD4 765 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 TMEM143Q96AN5 459 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 HVCN1Q96D96 273 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 CAPZA3Q96KX2 299 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 PNKPQ96T60 521 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 POP1Q99575 1024 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 TMEM117Q9H0C3 514 aa7.12□□□□□ -1.27
USP47-201ENST00000305481 POLR3FQ9H1D9 316 aaPredicted RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 DHX33Q9H6R0 707 aaKnown RBP7.12□□□□□ -1.27
USP47-201ENST00000305481 ATP6V0A4Q9HBG4 840 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms