RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 TNFAIP1Q13829 316 aa20.25■□□□□ 0.83
RNF139-201ENST00000303545 SLC30A5Q8TAD4 765 aa20.25■□□□□ 0.83
RNF139-201ENST00000303545 SLC35G2Q8TBE7 412 aa20.25■□□□□ 0.83
RNF139-201ENST00000303545 POP1Q99575 1024 aaKnown RBP20.25■□□□□ 0.83
RNF139-201ENST00000303545 PPP2R5AQ15172 486 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 SKIDA1Q1XH10 827 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 LMO3Q8TAP4 145 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 CASKIN2Q8WXE0 1202 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 CCDC127Q96BQ5 260 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 BTNL10A8MVZ5 291 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 ANKRD63C9JTQ0 380 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 PEX10O60683 326 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 TNFAIP3P21580 790 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 ADAT2Q7Z6V5 191 aaKnown RBP20.24■□□□□ 0.83
RNF139-201ENST00000303545 WRNIP1Q96S55 665 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 THAP2Q9H0W7 228 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 DBR1Q9UK59 544 aaKnown RBP20.24■□□□□ 0.83
RNF139-201ENST00000303545 DOCK5Q9H7D0 1870 aa20.24■□□□□ 0.83
RNF139-201ENST00000303545 ADRB2P07550 413 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 ITGA4P13612 1032 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 EPHB4P54760 987 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 C1orf220Q5T0J3 134 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 TAF3Q5VWG9 929 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 NAA35Q5VZE5 725 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 SNRNP48Q6IEG0 339 aaKnown RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 CBWD2Q8IUF1 395 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 GOLGA5Q8TBA6 731 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 TBC1D22BQ9NU19 505 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 USP20Q9Y2K6 914 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 BUB1BO60566 1050 aaPredicted RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 MAP2K1Q02750 393 aaPredicted RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 DDX42Q86XP3 938 aaKnown RBP eCLIP20.23■□□□□ 0.83
RNF139-201ENST00000303545 TEX2Q8IWB9 1127 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 DDX47Q9H0S4 455 aaKnown RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 VPS33BQ9H267 617 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 ZNF280AP59817 542 aaPredicted RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 IFI16Q16666 785 aaKnown RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 DNAJC21Q5F1R6 531 aaKnown RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 ANO5Q75V66 913 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 NIPA1Q7RTP0 329 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 IFT20Q8IY31 132 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 XXYLT1Q8NBI6 393 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 TMEM206Q9H813 350 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 RNF14Q9UBS8 474 aa20.23■□□□□ 0.83
RNF139-201ENST00000303545 NOC2LQ9Y3T9 749 aaKnown RBP20.23■□□□□ 0.83
RNF139-201ENST00000303545 CCDC66A2RUB6 948 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 PSMC5P62195 406 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 BSNDQ8WZ55 320 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 TOPORSQ9NS56 1045 aaPredicted RBP20.22■□□□□ 0.83
RNF139-201ENST00000303545 GABBR1Q9UBS5 961 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 LMNB1P20700 586 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 PRPF4BQ13523 1007 aaKnown RBP20.22■□□□□ 0.83
RNF139-201ENST00000303545 DLK2Q6UY11 383 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 NT5DC3Q86UY8 548 aa20.22■□□□□ 0.83
RNF139-201ENST00000303545 WDR64B1ANS9 1081 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 ADSSP30520 456 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 COPB2P35606 906 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 ZSCAN26Q16670 478 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 FOXR1Q6PIV2 292 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 INTS8Q75QN2 995 aaKnown RBP20.21■□□□□ 0.83
RNF139-201ENST00000303545 GOLGA6L1Q8N7Z2 621 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 CTNNBL1Q8WYA6 563 aaPredicted RBP20.21■□□□□ 0.83
RNF139-201ENST00000303545 GDF3Q9NR23 364 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 COL11A1P12107 1806 aaPredicted RBP20.21■□□□□ 0.83
RNF139-201ENST00000303545 LOXHD1Q8IVV2 1947 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 TMEM110-MUSTN1A8MSY1 372 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 CALCAP01258 141 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 NR3C2P08235 984 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 BACE1P56817 501 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
RNF139-201ENST00000303545 SYT11Q9BT88 431 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 COG5Q9UP83 839 aa20.21■□□□□ 0.83
RNF139-201ENST00000303545 ATMINO43313 823 aaPredicted RBP20.2■□□□□ 0.82
RNF139-201ENST00000303545 NPTX2P47972 431 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 GTF2BQ00403 316 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 PPARDQ03181 441 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 ZNF211Q13398 564 aaPredicted RBP20.2■□□□□ 0.82
RNF139-201ENST00000303545 GLE1Q53GS7 698 aaKnown RBP20.2■□□□□ 0.82
RNF139-201ENST00000303545 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 C4orf19Q8IY42 314 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 CEP170P1Q96L14 293 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 AGPAT1Q99943 283 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 TMEM117Q9H0C3 514 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 STXBP5LQ9Y2K9 1186 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 KRIT1O00522 736 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 ZNF862O60290 1169 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 SGPL1O95470 568 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 ZBTB48P10074 688 aaPredicted RBP20.2■□□□□ 0.82
RNF139-201ENST00000303545 TNNC1P63316 161 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 TTC19Q6DKK2 380 aaPredicted RBP20.2■□□□□ 0.82
RNF139-201ENST00000303545 SWSAP1Q6NVH7 229 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 PPM1KQ8N3J5 372 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 ARL8AQ96BM9 186 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 RABEP2Q9H5N1 569 aa20.2■□□□□ 0.82
RNF139-201ENST00000303545 DENND3A2RUS2 1198 aa20.19■□□□□ 0.82
RNF139-201ENST00000303545 PGRMC1O00264 195 aaKnown RBP20.19■□□□□ 0.82
RNF139-201ENST00000303545 PTPRAP18433 802 aa20.19■□□□□ 0.82
RNF139-201ENST00000303545 HLTFQ14527 1009 aaKnown RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms