RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 FAM228AQ86W67 206 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 IFNLR1Q8IU57 520 aaPredicted RBP27.02■■□□□ 1.92
HOXC9-201ENST00000303450 CCDC65Q8IXS2 484 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 DBF4BQ8NFT6 615 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 SPIRE2Q8WWL2 714 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 KIFC3Q9BVG8 833 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 PANK4Q9NVE7 773 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 DACT1Q9NYF0 836 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 ST3GAL5Q9UNP4 418 aa27.02■■□□□ 1.92
HOXC9-201ENST00000303450 RBAK-RBAKDNI3L0D1 243 aa27.01■■□□□ 1.91
HOXC9-201ENST00000303450 GTPBP6O43824 516 aaPredicted RBP27.01■■□□□ 1.91
HOXC9-201ENST00000303450 GAP43P17677 238 aa27.01■■□□□ 1.91
HOXC9-201ENST00000303450 CDCA2Q69YH5 1023 aaPredicted RBP27.01■■□□□ 1.91
HOXC9-201ENST00000303450 VWCEQ96DN2 955 aa27.01■■□□□ 1.91
HOXC9-201ENST00000303450 MINDY3Q9H8M7 445 aa27.01■■□□□ 1.91
HOXC9-201ENST00000303450 TRAK2O60296 914 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 FGFR4P22455 802 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 EPHB4P54760 987 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 HERC4Q5GLZ8 1057 aaPredicted RBP27■■□□□ 1.91
HOXC9-201ENST00000303450 CNKSR3Q6P9H4 555 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 PSRC1Q6PGN9 363 aaPredicted RBP27■■□□□ 1.91
HOXC9-201ENST00000303450 CATSPER4Q7RTX7 472 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 APBB2Q92870 758 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 NTPCRQ9BSD7 190 aaKnown RBP27■■□□□ 1.91
HOXC9-201ENST00000303450 HOOK1Q9UJC3 728 aaKnown RBP27■■□□□ 1.91
HOXC9-201ENST00000303450 ADGRA3Q8IWK6 1321 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 SLC16A4O15374 487 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 EFNA5P52803 228 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 MBTD1Q05BQ5 628 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 C16orf59Q7L2K0 433 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 SFR1Q86XK3 245 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 FAM178BQ8IXR5 827 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 ERVK-5Q9HDB9 667 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 SEL1LQ9UBV2 794 aa27■■□□□ 1.91
HOXC9-201ENST00000303450 FRMD3A2A2Y4 597 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 FGBP02675 491 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 ACTN1P12814 892 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 PCBP1Q15365 356 aaKnown RBP eCLIP26.99■■□□□ 1.91
HOXC9-201ENST00000303450 UNC13DQ70J99 1090 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 ZNF365Q70YC5 407 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 GDF15Q99988 308 aa26.99■■□□□ 1.91
HOXC9-201ENST00000303450 H0YCG3 227 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 K7ERI5 159 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 ERLIN2O94905 339 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 MCM4P33991 863 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 POSTNQ15063 836 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 MAPK6Q16659 721 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 UBE2OQ9C0C9 1292 aaKnown RBP26.98■■□□□ 1.91
HOXC9-201ENST00000303450 ARHGAP28Q9P2N2 729 aa26.98■■□□□ 1.91
HOXC9-201ENST00000303450 PVALEFA0A1B0GWK0 134 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 K7ENM7 598 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 PRR29P0C7W0 189 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 NCKAP1LP55160 1127 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 COASYQ13057 564 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 IKBKEQ14164 716 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 TMEM240Q5SV17 173 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 OTOP2Q7RTS6 562 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 SLC17A8Q8NDX2 589 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 TMEM161BQ8NDZ6 487 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.97■■□□□ 1.91
HOXC9-201ENST00000303450 FTHL17Q9BXU8 183 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 MRPL44Q9H9J2 332 aaKnown RBP26.97■■□□□ 1.91
HOXC9-201ENST00000303450 PRMT7Q9NVM4 692 aaPredicted RBP26.97■■□□□ 1.91
HOXC9-201ENST00000303450 TBC1D7Q9P0N9 293 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 PHLPP2Q6ZVD8 1323 aa26.97■■□□□ 1.91
HOXC9-201ENST00000303450 NCBP1Q09161 790 aaKnown RBP26.96■■□□□ 1.91
HOXC9-201ENST00000303450 DPYDQ12882 1025 aa26.96■■□□□ 1.91
HOXC9-201ENST00000303450 HAUS6Q7Z4H7 955 aa26.96■■□□□ 1.91
HOXC9-201ENST00000303450 TMEM134Q9H6X4 195 aa26.96■■□□□ 1.91
HOXC9-201ENST00000303450 DENND3A2RUS2 1198 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 PRKCBP05771 671 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 NMT1P30419 496 aaKnown RBP26.95■■□□□ 1.91
HOXC9-201ENST00000303450 PNOCQ13519 176 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 TCTN1Q2MV58 587 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 FAM43BQ6ZT52 329 aaPredicted RBP26.95■■□□□ 1.91
HOXC9-201ENST00000303450 ELOA2Q8IYF1 753 aaPredicted RBP26.95■■□□□ 1.91
HOXC9-201ENST00000303450 PRIMPOLQ96LW4 560 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 FIZ1Q96SL8 496 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 CCDC113Q9H0I3 377 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 FZD8Q9H461 694 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 OLFML3Q9NRN5 406 aa26.95■■□□□ 1.91
HOXC9-201ENST00000303450 MAPTP10636 758 aaKnown RBP26.95■■□□□ 1.9
HOXC9-201ENST00000303450 ZSCAN20P17040 1043 aaPredicted RBP26.95■■□□□ 1.9
HOXC9-201ENST00000303450 SCP2P22307 547 aa26.95■■□□□ 1.9
HOXC9-201ENST00000303450 CCDC47Q96A33 483 aaKnown RBP26.95■■□□□ 1.9
HOXC9-201ENST00000303450 TMX1Q9H3N1 280 aa26.95■■□□□ 1.9
HOXC9-201ENST00000303450 EXOC1Q9NV70 894 aa26.95■■□□□ 1.9
HOXC9-201ENST00000303450 PIN4Q9Y237 131 aaKnown RBP26.95■■□□□ 1.9
HOXC9-201ENST00000303450 ABHD14A-ACY1A0A1B0GW23 586 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 KLRC4O43908 158 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 TSPAN1O60635 241 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 BAIAP3O94812 1187 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 RPN1P04843 607 aaKnown RBP26.94■■□□□ 1.9
HOXC9-201ENST00000303450 ABCD1P33897 745 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 STRN3Q13033 797 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 FAM187BQ17R55 369 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 PPP4R3CPQ6ZMV5 832 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 ZNF720Q7Z2F6 126 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 CHST12Q9NRB3 414 aa26.94■■□□□ 1.9
HOXC9-201ENST00000303450 AGPAT5Q9NUQ2 364 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms