RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 BMT2Q1RMZ1 405 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 DPCR1Q3MIW9 517 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 ZNF410Q86VK4 478 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 FAM178BQ8IXR5 827 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 TRIM43Q96BQ3 446 aaPredicted RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 NLRP4Q96MN2 994 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 NOC4LQ9BVI4 516 aaKnown RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 CELF4Q9BZC1 486 aaKnown RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 WNT8AQ9H1J5 351 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 FZD8Q9H461 694 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 HOOK1Q9UJC3 728 aaKnown RBP10.47□□□□□ -0.73
RFX3-201ENST00000302303 CDY2AQ9Y6F7 541 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 ZMYM2Q9UBW7 1377 aa10.47□□□□□ -0.73
RFX3-201ENST00000302303 CCDC85CA6NKD9 419 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 CCDC169A6NNP5 214 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 TGFB1I1O43294 461 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 PRPF6O94906 941 aaKnown RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 DARSP14868 501 aaKnown RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 FGFR4P22455 802 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 HOXA11P31270 313 aaPredicted RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 THPOP40225 353 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 CRYBB1P53674 252 aaPredicted RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 PMS1P54277 932 aaKnown RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 NLRP12P59046 1061 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 DMP1Q13316 513 aaPredicted RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 SLC39A4Q6P5W5 647 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 TNS4Q8IZW8 715 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 ADSSL1Q8N142 457 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 TRIML1Q8N9V2 468 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 MAP7D2Q96T17 732 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 OSMRQ99650 979 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 HAPLN2Q9GZV7 340 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 KCTD10Q9H3F6 313 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 TMEM134Q9H6X4 195 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 AGO3Q9H9G7 860 aaKnown RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 MRPL44Q9H9J2 332 aaKnown RBP10.46□□□□□ -0.74
RFX3-201ENST00000302303 KMT5AQ9NQR1 393 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 EXOC1Q9NV70 894 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 MAPK8IP1Q9UQF2 711 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 ATP11BQ9Y2G3 1177 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 MROH7Q68CQ1 1323 aa10.46□□□□□ -0.74
RFX3-201ENST00000302303 MYH11P35749 1972 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 DCDC2CA8MYV0 355 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 TISP43B9A030 160 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 ABLIM1O14639 778 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 KIAA0355O15063 1070 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 B4GALT5O43286 388 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 CAND2O75155 1236 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 CAPN15O75808 1086 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 CTSHP09668 335 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 EIF4BP23588 611 aaKnown RBP10.45□□□□□ -0.74
RFX3-201ENST00000302303 LPIN1Q14693 890 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 PPP2R5AQ15172 486 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 TCTN1Q2MV58 587 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 ZCWPW2Q504Y3 356 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 FBXO47Q5MNV8 452 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 C11orf57Q6ZUT1 292 aaPredicted RBP10.45□□□□□ -0.74
RFX3-201ENST00000302303 FAM228AQ86W67 206 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 MAP4K3Q8IVH8 894 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 GUF1Q8N442 669 aaKnown RBP10.45□□□□□ -0.74
RFX3-201ENST00000302303 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 IFT74Q96LB3 600 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 GZF1Q9H116 711 aaPredicted RBP10.45□□□□□ -0.74
RFX3-201ENST00000302303 SEMA6BQ9H3T3 888 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 RMND1Q9NWS8 449 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 TBX20Q9UMR3 447 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 NOC2LQ9Y3T9 749 aaKnown RBP10.45□□□□□ -0.74
RFX3-201ENST00000302303 TRPV2Q9Y5S1 764 aa10.45□□□□□ -0.74
RFX3-201ENST00000302303 ANKRD63C9JTQ0 380 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 K7ENM7 598 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
RFX3-201ENST00000302303 NBNO60934 754 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 LETM1O95202 739 aaPredicted RBP10.44□□□□□ -0.74
RFX3-201ENST00000302303 GCNT3O95395 438 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 PIGRP01833 764 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 CLTBP09497 229 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 ADSSP30520 456 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 ZNF445P59923 1031 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 CDC42EP1Q00587 391 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 TYRO3Q06418 890 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 FAM187BQ17R55 369 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 L1TD1Q5T7N2 865 aaKnown RBP10.44□□□□□ -0.74
RFX3-201ENST00000302303 CENPPQ6IPU0 288 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 SRGAP1Q7Z6B7 1085 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 ZNF710Q8N1W2 664 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 NLRP7Q8WX94 980 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 SYAP1Q96A49 352 aaPredicted RBP10.44□□□□□ -0.74
RFX3-201ENST00000302303 PTPRHQ9HD43 1115 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 NOD1Q9Y239 953 aa10.44□□□□□ -0.74
RFX3-201ENST00000302303 K7ERI5 159 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 ACKR2O00590 384 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 TSPAN1O60635 241 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 RPLP2P05387 115 aaKnown RBP10.43□□□□□ -0.74
RFX3-201ENST00000302303 SELPP16109 830 aa10.43□□□□□ -0.74
RFX3-201ENST00000302303 CYP2C18P33260 490 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms