RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 REEP2Q9BRK0 252 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 ZNF302Q9NR11 478 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 TFR2Q9UP52 801 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 MORC2Q9Y6X9 1032 aaPredicted RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 CSPG5O95196 566 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 SLC9A1P19634 815 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 GNA15P30679 374 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 SLC18A3Q16572 532 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 SPOPLQ6IQ16 392 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 CCDC137Q6PK04 289 aaKnown RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 MAML1Q92585 1016 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 TSTA3Q13630 321 aaPredicted RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 PLCB4Q15147 1175 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 CDC42EP5Q6NZY7 148 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 GIMAP8Q8ND71 665 aaPredicted RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 RBAKQ9NYW8 714 aaPredicted RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 A0A0G2JND7 137 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 UCHL3P15374 230 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 TFDP2Q14188 446 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 RNPC3Q96LT9 517 aaKnown RBP22.2■■□□□ 1.14
LTBP3-201ENST00000301873 SMARCAL1Q9NZC9 954 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 SEPT6Q14141 434 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 BBS5Q8N3I7 341 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 POLR3FQ9H1D9 316 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 IPO11Q9UI26 975 aaKnown RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 FBXL5Q9UKA1 691 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 UBE4BO95155 1302 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 SRGAP2BP0DMP2 458 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 ESRRAP11474 423 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 KCNJ6P48051 423 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 PMS2P54278 862 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 RIN2Q8WYP3 895 aaPredicted RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 MTRQ99707 1265 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 CPSF3Q9UKF6 684 aaKnown RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 PFDN6O15212 129 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 BRAFP15056 766 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 ARL4CP56559 192 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 ATP6V1E2Q96A05 226 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 AGO2Q9UKV8 859 aaKnown RBP22.19■■□□□ 1.14
LTBP3-201ENST00000301873 INPP5FQ9Y2H2 1132 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 SUGT1Q9Y2Z0 365 aa22.19■■□□□ 1.14
LTBP3-201ENST00000301873 KRT37O76014 449 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 GALCP54803 685 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 PSMC1P62191 440 aaKnown RBP22.18■■□□□ 1.14
LTBP3-201ENST00000301873 PPWD1Q96BP3 646 aaKnown RBP22.18■■□□□ 1.14
LTBP3-201ENST00000301873 FAM167AQ96KS9 214 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 LRRC14Q15048 493 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 RNF139Q8WU17 664 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 INTUQ9ULD6 942 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 PRR12Q9ULL5 1215 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 SPARCL1Q14515 664 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 KIAA1841Q6NSI8 718 aa22.18■■□□□ 1.14
LTBP3-201ENST00000301873 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.18■■□□□ 1.14
LTBP3-201ENST00000301873 RFC1P35251 1148 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 BEND6Q5SZJ8 279 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 OTUD5Q96G74 571 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 NCF2P19878 526 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 KLK7P49862 253 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 THOC5Q13769 683 aaKnown RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 BAATQ14032 418 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 ZC2HC1CQ53FD0 456 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 SLC30A5Q8TAD4 765 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 CRAMP1Q96RY5 1269 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 IQANK1A0A1B0GTG1 560 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 SCP2P22307 547 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 CHRNA3P32297 505 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 TMPRSS15P98073 1019 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 PTPAQ15257 358 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 C16orf86Q6ZW13 317 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 ACAD9Q9H845 621 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 ZWINTO95229 277 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 MUM1L1Q5H9M0 696 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 TMCO4Q5TGY1 634 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 STRIP1Q5VSL9 837 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 SH2D3CQ8N5H7 860 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 RPAP3Q9H6T3 665 aaPredicted RBP22.17■■□□□ 1.14
LTBP3-201ENST00000301873 JMJD4Q9H9V9 463 aa22.17■■□□□ 1.14
LTBP3-201ENST00000301873 YWHABP31946 246 aaKnown RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 GPS1Q13098 491 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 MKRN4PQ13434 485 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 TWF2Q6IBS0 349 aaKnown RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 RWDD4Q6NW29 188 aaKnown RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 RYBPQ8N488 228 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 CFLARO15519 480 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 CALB1P05937 261 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 ACOT2P49753 483 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 SMAD1Q15797 465 aaKnown RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 NOA1Q8NC60 698 aaKnown RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 GOLPH3Q9H4A6 298 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 ACTR5Q9H9F9 607 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 TOPORSQ9NS56 1045 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 SSU72P8A0A1W2PR75 194 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 SLC12A1Q13621 1099 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 GBP7Q8N8V2 638 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-201ENST00000301873 NUDCD1Q96RS6 583 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 AGPAT1Q99943 283 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 ADAM33Q9BZ11 813 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 KLC2Q9H0B6 622 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 FHOD1Q9Y613 1164 aa22.16■■□□□ 1.14
LTBP3-201ENST00000301873 GMNCA6NCL1 334 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms