RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 RAVER2Q9HCJ3 691 aaKnown RBP19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 PI4KBQ9UBF8 816 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 FAM196BA6NMK8 535 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 SLFN12LQ6IEE8 588 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L15C9J2P7 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L13C9JLJ4 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L11C9JVI0 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L18D6R9N7 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L22D6RA61 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L17D6RBQ6 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L19D6RCP7 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L20D6RJB6 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 hCG_1984214I3L0E3 225 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 PRPF4O43172 522 aaKnown RBP eCLIP19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 KCNA4P22459 653 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L24Q0WX57 530 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 ACCSLQ4AC99 568 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 USP17L6PQ6QN14 398 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 UNC13DQ70J99 1090 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 ZNF713Q8N859 430 aaPredicted RBP19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 GPR108Q9NPR9 543 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 ZNF229Q9UJW7 825 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 ZNF568Q3ZCX4 644 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 PPP4R3CPQ6ZMV5 832 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 TEKT4Q8WW24 435 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 STOML1Q9UBI4 398 aa19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 DIS3Q9Y2L1 958 aaKnown RBP19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
PITPNC1-201ENST00000299954 GPC3P51654 580 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 GUCY1A3Q02108 690 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 COASYQ13057 564 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 MTMR1Q13613 665 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 PRMT1Q99873 361 aaKnown RBP19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 VCAM1P19320 739 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 ZBTB12Q9Y330 459 aaPredicted RBP19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 LGALS16A8MUM7 142 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 THEM5Q8N1Q8 247 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 ADNPQ9H2P0 1102 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 ATP6V0A4Q9HBG4 840 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 CCDC144BQ3MJ40 725 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 DTX3LQ8TDB6 740 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 ARHGAP26Q9UNA1 814 aa19.52■□□□□ 0.72
PITPNC1-201ENST00000299954 POTEB3A0JP26 581 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 POTECB2RU33 542 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 DFFAO00273 331 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 CHUKO15111 745 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 GH2P01242 217 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 FTLP02792 175 aaPredicted RBP19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 NEK2P51955 445 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 POTEBQ6S5H4 581 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 NDUFAF2Q8N183 169 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 RAD54LQ92698 747 aa19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 SRP68Q9UHB9 627 aaKnown RBP19.52■□□□□ 0.71
PITPNC1-201ENST00000299954 PP2D1A8MPX8 630 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 CYB5R4Q7L1T6 521 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 HPCAL4Q9UM19 191 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ARHGEF12Q9NZN5 1544 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ATP9BO43861 1147 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ENO1P06733 434 aaKnown RBP19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 SMARCA1P28370 1054 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 RECQLP46063 649 aaPredicted RBP19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 RINLQ6ZS11 566 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 PLEKHF1Q96S99 279 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 SIK2Q9H0K1 926 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 KCNA2P16389 499 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ROR1Q01973 937 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 TMEM35BQ8NCS4 154 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 INTS2Q9H0H0 1204 aaKnown RBP19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 TRAF3IP3Q9Y228 551 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 E2F8A0AVK6 867 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 KDSRQ06136 332 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 MKRN4PQ13434 485 aaPredicted RBP19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 PADI6Q6TGC4 694 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 TBC1D10CQ8IV04 446 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 RNF123Q5XPI4 1314 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 CCDC78A2IDD5 438 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 TEX33O43247 280 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 SLC9A5Q14940 896 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 SUPT20HL1Q3ZLR7 823 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ICE2Q659A1 982 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 RHPN2Q8IUC4 686 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 KIAA2013Q8IYS2 634 aa19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 CDV3Q9UKY7 258 aaKnown RBP19.51■□□□□ 0.71
PITPNC1-201ENST00000299954 ATP5HO75947 161 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 ATP1A1P05023 1023 aaKnown RBP19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 GNA15P30679 374 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 HEATR6Q6AI08 1181 aaKnown RBP19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 SH3KBP1Q96B97 665 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 TEX12Q9BXU0 123 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 DRAP1Q14919 205 aaPredicted RBP19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 COBLL1Q53SF7 1204 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 KDM1AO60341 852 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 OR6P1Q8NGX9 317 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 UNC45AQ9H3U1 944 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 OSBPL3Q9H4L5 887 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 PRELPP51888 382 aa19.5■□□□□ 0.71
PITPNC1-201ENST00000299954 PTPN12Q05209 780 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms