RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 RAB14P61106 215 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SIX6OS1Q8N1H7 587 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 GALNT4Q8N4A0 578 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SNF8Q96H20 258 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SLC40A1Q9NP59 571 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 ADAM22Q9P0K1 906 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 KLHL8Q9P2G9 620 aaPredicted RBP15.78■□□□□ 0.12
SCN3B-201ENST00000299333 COPB2P35606 906 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 DLGAP5Q15398 846 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 CCDC137Q6PK04 289 aaKnown RBP15.78■□□□□ 0.12
SCN3B-201ENST00000299333 KCTD1Q719H9 257 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 B4GALNT2Q8NHY0 566 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 CYGBQ8WWM9 190 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 OSBPL3Q9H4L5 887 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 PNMA2Q9UL42 364 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SH2B2O14492 632 aaPredicted RBP15.78■□□□□ 0.12
SCN3B-201ENST00000299333 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 CEP170P1Q96L14 293 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 NPHS2Q9NP85 383 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SLC12A6Q9UHW9 1150 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 MRPS35P82673 323 aaKnown RBP15.78■□□□□ 0.12
SCN3B-201ENST00000299333 LARGE2Q8N3Y3 721 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 PBXIP1Q96AQ6 731 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 EME1Q96AY2 570 aa15.78■□□□□ 0.12
SCN3B-201ENST00000299333 USP15Q9Y4E8 981 aaPredicted RBP15.78■□□□□ 0.12
SCN3B-201ENST00000299333 SNUPNO95149 360 aaKnown RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 ATXN3P54252 364 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 LBRQ14739 615 aaKnown RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 PASD1Q8IV76 773 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 RIN2Q8WYP3 895 aaPredicted RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 COA7Q96BR5 231 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 KDM5AP29375 1690 aaKnown RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 GCC2Q8IWJ2 1684 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 SMAPO00193 183 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 AKAP10O43572 662 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 TCIRG1Q13488 830 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 SPATA4Q8NEY3 305 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 RNPEPQ9H4A4 650 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 PCP11498 1178 aaKnown RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 MLH1P40692 756 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 PHKA1P46020 1223 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 RWDD4Q6NW29 188 aaKnown RBP15.77■□□□□ 0.12
SCN3B-201ENST00000299333 ADAM33Q9BZ11 813 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 RUBCNLQ9H714 662 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 AMACRQ9UHK6 382 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
SCN3B-201ENST00000299333 FAM187AA6NFU0 413 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF233A6NK53 670 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 GOLGA8RI6L899 631 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 XPOTO43592 962 aaKnown RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 SLC16A2P36021 539 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 SCNN1DP51172 638 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 VCPP55072 806 aaKnown RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 TRIP10Q15642 601 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 PPP4R3CPQ6ZMV5 832 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF555Q8NEP9 628 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 CCT7Q99832 543 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 MRPS26Q9BYN8 205 aaKnown RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 GID8Q9NWU2 228 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 SFI1A8K8P3 1242 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 TEX33O43247 280 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 PATL1Q86TB9 770 aaKnown RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 HEATR4Q86WZ0 1026 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 DHX40Q8IX18 779 aaKnown RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 DDIASQ8IXT1 998 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 TTC13Q8NBP0 860 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 BPIFA3Q9BQP9 254 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 SIKE1Q9BRV8 207 aa15.77■□□□□ 0.11
SCN3B-201ENST00000299333 CAB39Q9Y376 341 aaPredicted RBP15.77■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF185O15231 689 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 PLEKHM3Q6ZWE6 761 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 HIC2Q96JB3 615 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
SCN3B-201ENST00000299333 TUBGCP3Q96CW5 907 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 C8orf37Q96NL8 207 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 NUP85Q9BW27 656 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 IFNAR1P17181 557 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 SMARCA1P28370 1054 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF394Q53GI3 561 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 TTC8Q8TAM2 541 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 ZNF564Q8TBZ8 553 aaPredicted RBP15.76■□□□□ 0.11
SCN3B-201ENST00000299333 TEKT4Q8WW24 435 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 C1orf54Q8WWF1 131 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 ERP27Q96DN0 273 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 SLITRK6Q9H5Y7 841 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 KCNQ3O43525 872 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 DEFA1P59665 94 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 DEFA3P59666 94 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 INPP5AQ14642 412 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 ASPRV1Q53RT3 343 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
SCN3B-201ENST00000299333 C16orf96A6NNT2 1141 aa15.75■□□□□ 0.11
SCN3B-201ENST00000299333 SCP2P22307 547 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms