RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 PIGOQ8TEQ8 1089 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 CRYGNQ8WXF5 182 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 CAMKK2Q96RR4 588 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 OSBPL1AQ9BXW6 950 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 GLIS2Q9BZE0 524 aaPredicted RBP13.01□□□□□ -0.33
CLPB-201ENST00000294053 DNAJC17Q9NVM6 304 aaKnown RBP13.01□□□□□ -0.33
CLPB-201ENST00000294053 COBLL1Q53SF7 1204 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 SYDE2Q5VT97 1194 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 NUGGCQ68CJ6 796 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 ZNF662Q6ZS27 426 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 FMO2Q99518 471 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 KDM4CQ9H3R0 1056 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 FGFR1OP2Q9NVK5 253 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 CENPFP49454 3210 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 PGRMC1O00264 195 aaKnown RBP13.01□□□□□ -0.33
CLPB-201ENST00000294053 MSH4O15457 936 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 TLR2O60603 784 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 NOL4O94818 638 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 CFBP00751 764 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 FGGP02679 453 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 BMP3P12645 472 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 LACTBP83111 547 aaPredicted RBP13.01□□□□□ -0.33
CLPB-201ENST00000294053 LRRC63Q05C16 580 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 LONP2Q86WA8 852 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
CLPB-201ENST00000294053 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 RNF14Q9UBS8 474 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 COL4A3BPQ9Y5P4 624 aa13.01□□□□□ -0.33
CLPB-201ENST00000294053 ZNF646O15015 1829 aaPredicted RBP13□□□□□ -0.33
CLPB-201ENST00000294053 GOLGA6L10A0A0M3HER8 536 aa13□□□□□ -0.33
CLPB-201ENST00000294053 MYBP10242 640 aa13□□□□□ -0.33
CLPB-201ENST00000294053 HOXD13P35453 343 aa13□□□□□ -0.33
CLPB-201ENST00000294053 POLE2P56282 527 aa13□□□□□ -0.33
CLPB-201ENST00000294053 SLC8A3P57103 927 aa13□□□□□ -0.33
CLPB-201ENST00000294053 ATP11AP98196 1134 aa13□□□□□ -0.33
CLPB-201ENST00000294053 ASIC2Q16515 512 aa13□□□□□ -0.33
CLPB-201ENST00000294053 DENND2CQ68D51 928 aa13□□□□□ -0.33
CLPB-201ENST00000294053 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
CLPB-201ENST00000294053 METTL13Q8N6R0 699 aa13□□□□□ -0.33
CLPB-201ENST00000294053 CCDC26Q8TAB7 109 aa13□□□□□ -0.33
CLPB-201ENST00000294053 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
CLPB-201ENST00000294053 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
CLPB-201ENST00000294053 FBXO28Q9NVF7 368 aa13□□□□□ -0.33
CLPB-201ENST00000294053 TMEM110-MUSTN1A8MSY1 372 aa13□□□□□ -0.33
CLPB-201ENST00000294053 KRT16P08779 473 aa13□□□□□ -0.33
CLPB-201ENST00000294053 FKBP3Q00688 224 aaKnown RBP13□□□□□ -0.33
CLPB-201ENST00000294053 DGKZQ13574 1117 aa13□□□□□ -0.33
CLPB-201ENST00000294053 MTMR3Q13615 1198 aa13□□□□□ -0.33
CLPB-201ENST00000294053 NAB2Q15742 525 aa13□□□□□ -0.33
CLPB-201ENST00000294053 MEI1Q5TIA1 1274 aa13□□□□□ -0.33
CLPB-201ENST00000294053 SFR1Q86XK3 245 aa13□□□□□ -0.33
CLPB-201ENST00000294053 TSC22D3Q99576 134 aa13□□□□□ -0.33
CLPB-201ENST00000294053 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
CLPB-201ENST00000294053 BHMT2Q9H2M3 363 aa13□□□□□ -0.33
CLPB-201ENST00000294053 KCTD10Q9H3F6 313 aa13□□□□□ -0.33
CLPB-201ENST00000294053 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
CLPB-201ENST00000294053 KIF3CO14782 793 aa13□□□□□ -0.33
CLPB-201ENST00000294053 DNAJC8O75937 253 aaPredicted RBP13□□□□□ -0.33
CLPB-201ENST00000294053 FGFR4P22455 802 aa13□□□□□ -0.33
CLPB-201ENST00000294053 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
CLPB-201ENST00000294053 ERFP50548 548 aa13□□□□□ -0.33
CLPB-201ENST00000294053 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
CLPB-201ENST00000294053 GRIK3Q13003 919 aa13□□□□□ -0.33
CLPB-201ENST00000294053 CUL1Q13616 776 aa13□□□□□ -0.33
CLPB-201ENST00000294053 CTTNQ14247 550 aaKnown RBP13□□□□□ -0.33
CLPB-201ENST00000294053 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
CLPB-201ENST00000294053 MREGQ8N565 214 aa13□□□□□ -0.33
CLPB-201ENST00000294053 RUBCNQ92622 972 aa13□□□□□ -0.33
CLPB-201ENST00000294053 TSG101Q99816 390 aa13□□□□□ -0.33
CLPB-201ENST00000294053 RUSC1Q9BVN2 902 aa13□□□□□ -0.33
CLPB-201ENST00000294053 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13□□□□□ -0.33
CLPB-201ENST00000294053 TCP11X1B4DZS4 312 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 H0YGN5 161 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 NQO1P15559 274 aaKnown RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 USP11P51784 963 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 SLC29A2Q14542 456 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 HYIQ5T013 277 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 HGSNATQ68CP4 663 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 LRIG3Q6UXM1 1119 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 NT5C3AQ9H0P0 336 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLPB-201ENST00000294053 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 NR2E1Q9Y466 385 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 NFS1Q9Y697 457 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 A0A1W2PQJ5 194 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 F8VZ95 297 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 SERPING1P05155 500 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 TNFRSF8P28908 595 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 ADAM9Q13443 819 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 GIT2Q14161 759 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 DCAF17Q5H9S7 520 aaPredicted RBP12.99□□□□□ -0.33
CLPB-201ENST00000294053 ANKRD20A2Q5SQ80 823 aa12.99□□□□□ -0.33
CLPB-201ENST00000294053 ANKRD20A1Q5TYW2 823 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms