RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 DHX38Q92620 1227 aaKnown RBP17.17■□□□□ 0.34
SSRP1-202ENST00000293880 PAWRQ96IZ0 340 aaKnown RBP17.17■□□□□ 0.34
SSRP1-202ENST00000293880 C11orf70Q9BRQ4 267 aa17.17■□□□□ 0.34
SSRP1-202ENST00000293880 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
SSRP1-202ENST00000293880 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
SSRP1-202ENST00000293880 NEO1Q92859 1461 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 M0QYV0 167 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 MYL1P05976 194 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 WDR11Q9BZH6 1224 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ADAM22Q9P0K1 906 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 CEP72Q9P209 647 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ATP10DQ9P241 1426 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 PYGBP11216 843 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 TMED10P49755 219 aaKnown RBP17.16■□□□□ 0.34
SSRP1-202ENST00000293880 DDX42Q86XP3 938 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSRP1-202ENST00000293880 LRRC37BQ96QE4 947 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 FBXW10Q5XX13 1052 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ADNPQ9H2P0 1102 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 NPHP4O75161 1426 aaPredicted RBP17.16■□□□□ 0.34
SSRP1-202ENST00000293880 NEMP1O14524 444 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 HSPA6P17066 643 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ADORA2BP29275 332 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
SSRP1-202ENST00000293880 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 PP2D1A8MPX8 630 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 DFFAO00273 331 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 PRPF4O43172 522 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ARFIP2P53365 341 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 TRAF7Q6Q0C0 670 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 ETNK1Q9HBU6 452 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
SSRP1-202ENST00000293880 CASS4Q9NQ75 786 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 CDK8P49336 464 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 CEP55Q53EZ4 464 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 ACBD5Q5T8D3 534 aaPredicted RBP17.15■□□□□ 0.34
SSRP1-202ENST00000293880 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 BTBD6Q96KE9 485 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 NDE1Q9NXR1 346 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 PTPRTO14522 1441 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 FOXN1O15353 648 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 KRT37O76014 449 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 TOB2Q14106 344 aaPredicted RBP17.15■□□□□ 0.34
SSRP1-202ENST00000293880 KDSRQ06136 332 aa17.15■□□□□ 0.34
SSRP1-202ENST00000293880 CACNB2Q08289 660 aaPredicted RBP17.15■□□□□ 0.34
SSRP1-202ENST00000293880 COASYQ13057 564 aa17.14■□□□□ 0.34
SSRP1-202ENST00000293880 C11orf74Q86VG3 221 aa17.14■□□□□ 0.34
SSRP1-202ENST00000293880 RAD54LQ92698 747 aa17.14■□□□□ 0.34
SSRP1-202ENST00000293880 UBE4BO95155 1302 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 CCDC78A2IDD5 438 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 TEX33O43247 280 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 MLH1P40692 756 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 UBA6A0AVT1 1052 aaPredicted RBP17.14■□□□□ 0.33
SSRP1-202ENST00000293880 ATP11BQ9Y2G3 1177 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
SSRP1-202ENST00000293880 PNMA6FA0A0J9YX94 578 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 E5RI56 91 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 PODXLO00592 558 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 GPC5P78333 572 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 LONP2Q86WA8 852 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 ZNF513Q8N8E2 541 aaPredicted RBP17.14■□□□□ 0.33
SSRP1-202ENST00000293880 INTS2Q9H0H0 1204 aaKnown RBP17.14■□□□□ 0.33
SSRP1-202ENST00000293880 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 PCDHA6Q9UN73 950 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 PCDHA8Q9Y5H6 950 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 RASSF10A6NK89 507 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 NR3C1P04150 777 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 KRT8P05787 483 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 MORF4L2Q15014 288 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 ZNF699Q32M78 642 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
SSRP1-202ENST00000293880 KIF1CO43896 1103 aaKnown RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 BRAFP15056 766 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 SMAD5Q99717 465 aaKnown RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 PNMA2Q9UL42 364 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 SEMA3EO15041 775 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 MTF1Q14872 753 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 PPHLN1Q8NEY8 458 aaKnown RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 CNKSR1Q969H4 720 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 IPO5O00410 1097 aaKnown RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 MOCS2O96007 188 aaPredicted RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 TAS2R42Q7RTR8 314 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 EGFL8Q99944 293 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 C6orf203Q9P0P8 240 aaPredicted RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 TRIM33Q9UPN9 1127 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 FAM196BA6NMK8 535 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 KPNA7A9QM74 516 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 TCP11X1B4DZS4 312 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.332e-9■□□□□ 9.9
SSRP1-202ENST00000293880 ROR1Q01973 937 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 RHOT2Q8IXI1 618 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 NUP93Q8N1F7 819 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 CALR3Q96L12 384 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms