RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 RAPGEF5Q92565 580 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 MRIQ9BWK5 157 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.23■□□□□ 0.51
CHRNE-201ENST00000293780 DDX20Q9UHI6 824 aaKnown RBP18.23■□□□□ 0.51
CHRNE-201ENST00000293780 ANKRD62A6NC57 917 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 TRAPPC3O43617 180 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 ECE2O60344 883 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 SHBGP04278 402 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 BFSP1Q12934 665 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 DUPD1Q68J44 220 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 C6orf89Q6UWU4 347 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 DAW1Q8N136 415 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 MDM1Q8TC05 714 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 NACC1Q96RE7 527 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 AGPAT1Q99943 283 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 TXLNGYQ9BZA5 131 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
CHRNE-201ENST00000293780 SNX24Q9Y343 169 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 ALG6Q9Y672 507 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 TMEM110-MUSTN1A8MSY1 372 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 DDX39AO00148 427 aaKnown RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 HIP1RO75146 1068 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 PPFIA2O75334 1257 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 FSBPO95073 299 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 MARCKSL1P49006 195 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ARHGEF19Q8IW93 802 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 CNPY4Q8N129 248 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 PRPF38AQ8NAV1 312 aaKnown RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ZSWIM2Q8NEG5 633 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 KRT35Q92764 455 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ERP44Q9BS26 406 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ZNF577Q9BSK1 485 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 CARD9Q9H257 536 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 EPB41L4BQ9H329 900 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 UBE2TQ9NPD8 197 aaPredicted RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ZDHHC18Q9NUE0 388 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 DAAM1Q9Y4D1 1078 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 H0YHG0 523 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 POLR2MP0CAP2 368 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 IFFO1Q0D2I5 559 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 KIF22Q14807 665 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 ZNF746Q6NUN9 644 aaPredicted RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 YTHDF3Q7Z739 585 aaKnown RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 LXNQ9BS40 222 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 GOPCQ9HD26 462 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 PKD2L1Q9P0L9 805 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.22■□□□□ 0.51
CHRNE-201ENST00000293780 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
CHRNE-201ENST00000293780 EMSYQ7Z589 1322 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 MYH11P35749 1972 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 CAND2O75155 1236 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 VCAM1P19320 739 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 PLTPP55058 493 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 MAPK7Q13164 816 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 UBAP2Q5T6F2 1119 aaKnown RBP18.21■□□□□ 0.51
CHRNE-201ENST00000293780 KCTD17Q8N5Z5 321 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 C18orf8Q96DM3 657 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 RAB17Q9H0T7 212 aa18.21■□□□□ 0.51
CHRNE-201ENST00000293780 SRRM3A6NNA2 597 aaPredicted RBP18.21■□□□□ 0.5
CHRNE-201ENST00000293780 TULP1O00294 542 aaPredicted RBP18.21■□□□□ 0.5
CHRNE-201ENST00000293780 FTLP02792 175 aaPredicted RBP18.21■□□□□ 0.5
CHRNE-201ENST00000293780 PPP3CAQ08209 521 aa18.21■□□□□ 0.5
CHRNE-201ENST00000293780 ZDHHC14Q8IZN3 488 aa18.21■□□□□ 0.5
CHRNE-201ENST00000293780 KAT5Q92993 513 aa18.21■□□□□ 0.5
CHRNE-201ENST00000293780 CTTNBP2NLQ9P2B4 639 aa18.21■□□□□ 0.5
CHRNE-201ENST00000293780 DIS3Q9Y2L1 958 aaKnown RBP18.21■□□□□ 0.5
CHRNE-201ENST00000293780 PLSCR1O15162 318 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 CCDC172P0C7W6 258 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 KRT13P13646 458 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 SPRED3Q2MJR0 410 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 JAMLQ86YT9 394 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 MASTLQ96GX5 879 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 STRA6Q9BX79 667 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 SERPINA10Q9UK55 444 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 ODF2LQ9ULJ1 636 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 UBE4BO95155 1302 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 ARHGEF35A5YM69 484 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 PHF20L1A8MW92 1017 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 K7ENM7 598 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 GCLMP48507 274 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 ZYXQ15942 572 aaKnown RBP18.2■□□□□ 0.5
CHRNE-201ENST00000293780 ZDHHC24Q6UX98 284 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 STXBP4Q6ZWJ1 553 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 CPNE8Q86YQ8 564 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 FBXO25Q8TCJ0 367 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 PSMD1Q99460 953 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 SH2D3AQ9BRG2 576 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 ACP6Q9NPH0 428 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 PNMA2Q9UL42 364 aa18.2■□□□□ 0.5
CHRNE-201ENST00000293780 GOLGA6L10A0A0M3HER8 536 aa18.19■□□□□ 0.5
CHRNE-201ENST00000293780 USP8P40818 1118 aa18.19■□□□□ 0.5
CHRNE-201ENST00000293780 BYSLQ13895 437 aaKnown RBP18.19■□□□□ 0.5
CHRNE-201ENST00000293780 COL23A1Q86Y22 540 aaPredicted RBP18.19■□□□□ 0.5
CHRNE-201ENST00000293780 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms