RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 KAT6AQ92794 2004 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 DNM1LO00429 736 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 PDXKO00764 312 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 SRGAP2CP0DJJ0 459 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 CYP2C9P11712 490 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 TPM4P67936 248 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 POU5F1BQ06416 359 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 TPD52L1Q16890 204 aaPredicted RBP20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 PPP4R3CPQ6ZMV5 832 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 PHF24Q9UPV7 400 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 TRAF3IP3Q9Y228 551 aa20.79■□□□□ 0.92
PDLIM3-202ENST00000284770 ZNF18P17022 549 aa20.78■□□□□ 0.92
PDLIM3-202ENST00000284770 ITGA7Q13683 1181 aa20.78■□□□□ 0.92
PDLIM3-202ENST00000284770 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
PDLIM3-202ENST00000284770 CDCA2Q69YH5 1023 aaPredicted RBP20.78■□□□□ 0.92
PDLIM3-202ENST00000284770 TYW1Q9NV66 732 aaKnown RBP20.78■□□□□ 0.92
PDLIM3-202ENST00000284770 ZMYM2Q9UBW7 1377 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 A0A1W2PQ45 241 aaPredicted RBP20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 A0A1W2PQY0 241 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 TGFB1I1O43294 461 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 VTNP04004 478 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 EFNA5P52803 228 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 CDC42EP1Q00587 391 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 GDF6Q6KF10 455 aaPredicted RBP20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 RUFY4Q6ZNE9 571 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 MAP4K3Q8IVH8 894 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 SYCP3Q8IZU3 236 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 CSGALNACT2Q8N6G5 542 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 NLRP4Q96MN2 994 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 NFKBIZQ9BYH8 718 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 GBP3Q9H0R5 595 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 C2orf40Q9H1Z8 148 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 TMEM134Q9H6X4 195 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 EXOC7Q9UPT5 735 aa20.77■□□□□ 0.92
PDLIM3-202ENST00000284770 K7ERI5 159 aa20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 ATP1A3P13637 1013 aa20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 PTPN11Q06124 597 aaPredicted RBP20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 EDRF1Q3B7T1 1238 aa20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 TAF2Q6P1X5 1199 aa20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 TAS1R3Q7RTX0 852 aa20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 FAM49AQ9H0Q0 323 aaPredicted RBP20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 SAMSN1Q9NSI8 373 aaKnown RBP20.77■□□□□ 0.91
PDLIM3-202ENST00000284770 EVPLQ92817 2033 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 CALUO43852 315 aaPredicted RBP20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 ZNF75DP51815 510 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 PTENP60484 403 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 HS2ST1Q7LGA3 356 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 ZBTB8OSQ8IWT0 167 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 DNAJB3Q8WWF6 145 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 SRRTQ9BXP5 876 aaKnown RBP20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 TRIM5Q9C035 493 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 CRISPLD2Q9H0B8 497 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 IFT122Q9HBG6 1241 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 STARD7Q9NQZ5 370 aa20.76■□□□□ 0.91
PDLIM3-202ENST00000284770 SGPL1O95470 568 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 GPC3P51654 580 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 FKBP3Q00688 224 aaKnown RBP20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 STRN3Q13033 797 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 CDKAL1Q5VV42 579 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 NME8Q8N427 588 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 GOLGA5Q8TBA6 731 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 NOC3LQ8WTT2 800 aaKnown RBP20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 IKZF4Q9H2S9 585 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 PRDM10Q9NQV6 1147 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 PHLPP2Q6ZVD8 1323 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 BRCA2P51587 3418 aa20.75■□□□□ 0.91
PDLIM3-202ENST00000284770 PHKA2P46019 1235 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 NLRP11P59045 1033 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 SNRPFP62306 86 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 ZNF410Q86VK4 478 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 IFNLR1Q8IU57 520 aaPredicted RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 SLC43A3Q8NBI5 491 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 U2AF1L4Q8WU68 220 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 ZNF668Q96K58 619 aaPredicted RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 CCDC113Q9H0I3 377 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 THAP9Q9H5L6 903 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 CGNQ9P2M7 1197 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 A0A087WZ62 844 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 FGFR1OPO95684 399 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 NFIL3Q16649 462 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 LRRC55Q6ZSA7 311 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 SERINC5Q86VE9 423 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 ZC3H3Q8IXZ2 948 aaKnown RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 ZNF710Q8N1W2 664 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 NLRP7Q8WX94 980 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 FDXACB1Q9BRP7 624 aaPredicted RBP20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 ADAMTS10Q9H324 1103 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 AGPAT3Q9NRZ7 376 aa20.74■□□□□ 0.91
PDLIM3-202ENST00000284770 GPR32O75388 356 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 FANCCQ00597 558 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 ADAM9Q13443 819 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 PTGISQ16647 500 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 MAPK6Q16659 721 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 HSP90AA4PQ58FG1 418 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 IRF2BP1Q8IU81 584 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 EEF2KMTQ96G04 330 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 MRFAP1L1Q96HT8 127 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 CTAGE1Q96RT6 745 aa20.73■□□□□ 0.91
PDLIM3-202ENST00000284770 PPP1R16BQ96T49 567 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms