RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.82
SSC4D-201ENST00000275560 CCNHP51946 323 aaPredicted RBP20.14■□□□□ 0.82
SSC4D-201ENST00000275560 SEPT14Q6ZU15 432 aa20.14■□□□□ 0.82
SSC4D-201ENST00000275560 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.82
SSC4D-201ENST00000275560 CRAMP1Q96RY5 1269 aa20.14■□□□□ 0.82
SSC4D-201ENST00000275560 INTUQ9ULD6 942 aa20.14■□□□□ 0.82
SSC4D-201ENST00000275560 ZBTB39O15060 712 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 AGTP01019 485 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 TNIP1Q15025 636 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 C6orf118Q5T5N4 469 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 CCDC137Q6PK04 289 aaKnown RBP20.14■□□□□ 0.81
SSC4D-201ENST00000275560 PIGOQ8TEQ8 1089 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 BTBD6Q96KE9 485 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 TYW1Q9NV66 732 aaKnown RBP20.14■□□□□ 0.81
SSC4D-201ENST00000275560 RGL1Q9NZL6 768 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 DNM3Q9UQ16 869 aa20.14■□□□□ 0.81
SSC4D-201ENST00000275560 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 GPR75-ASB3A0A0A6YYF3 556 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 TNFAIP3P21580 790 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 SPIRE1Q08AE8 756 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
SSC4D-201ENST00000275560 NUGGCQ68CJ6 796 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 BZW1Q7L1Q6 419 aaKnown RBP20.13■□□□□ 0.81
SSC4D-201ENST00000275560 FAM186BQ8IYM0 893 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 KCNV2Q8TDN2 545 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 HOOK2Q96ED9 719 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
SSC4D-201ENST00000275560 SBF2Q86WG5 1849 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 FAM187AA6NFU0 413 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 LMNB1P20700 586 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 HOXA7P31268 230 aaPredicted RBP20.13■□□□□ 0.81
SSC4D-201ENST00000275560 CYP2J2P51589 502 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 ADCY2Q08462 1091 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 AMIGO3Q86WK7 504 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 ANO3Q9BYT9 981 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 ARHGEF10LQ9HCE6 1279 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 CTTNBP2NLQ9P2B4 639 aa20.13■□□□□ 0.81
SSC4D-201ENST00000275560 MPHOSPH10O00566 681 aaKnown RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 PHF2O75151 1096 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 SNHG28P0DPA3 235 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 DHX34Q14147 1143 aaKnown RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 ZNF268Q14587 947 aaPredicted RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 PTF1AQ7RTS3 328 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 CYP2W1Q8TAV3 490 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 KLHL29Q96CT2 875 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 SPDL1Q96EA4 605 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 PFASO15067 1338 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 TMEM120BA0PK00 339 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 ZBTB5O15062 677 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 PEX19P40855 299 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 NOVP48745 357 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 MESDQ14696 234 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 SYT2Q8N9I0 419 aaPredicted RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 KCNK9Q9NPC2 374 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 RASAL2Q9UJF2 1139 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 PCDHA3Q9Y5H8 950 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 FOXN3O00409 490 aaPredicted RBP20.12■□□□□ 0.81
SSC4D-201ENST00000275560 NT5C2P49902 561 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 CCDC105Q8IYK2 499 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 FITM2Q8N6M3 262 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 BORCS6Q96GS4 357 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 RMDN2Q96LZ7 410 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 SYT11Q9BT88 431 aa20.12■□□□□ 0.81
SSC4D-201ENST00000275560 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 PYGMP11217 842 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 FMO5P49326 533 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 SPDYCQ5MJ68 293 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 MFSD14BQ5SR56 506 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 CRELD2Q6UXH1 353 aaPredicted RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 NAP1L3Q99457 506 aaPredicted RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 FAM167BQ9BTA0 163 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 STK33Q9BYT3 514 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 METTL14Q9HCE5 456 aaKnown RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 ACP6Q9NPH0 428 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 ZMYM2Q9UBW7 1377 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 OAS1P00973 400 aaKnown RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 RPL13P26373 211 aaKnown RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 RIPK1Q13546 671 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 MPP2Q14168 576 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 ZNF804AQ7Z570 1209 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 PWWP2AQ96N64 755 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 NSRP1Q9H0G5 558 aaKnown RBP20.11■□□□□ 0.81
SSC4D-201ENST00000275560 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
SSC4D-201ENST00000275560 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 ZNF335Q9H4Z2 1342 aaPredicted RBP20.1■□□□□ 0.81
SSC4D-201ENST00000275560 CFAP73A6NFT4 308 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 TBCAO75347 108 aaKnown RBP20.1■□□□□ 0.81
SSC4D-201ENST00000275560 PDE6CP51160 858 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 QRICH1Q2TAL8 776 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 PHLDB3Q6NSJ2 640 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 ARHGEF2Q92974 986 aaKnown RBP20.1■□□□□ 0.81
SSC4D-201ENST00000275560 MTRF1LQ9UGC7 380 aaKnown RBP20.1■□□□□ 0.81
SSC4D-201ENST00000275560 CLGNO14967 610 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 MAP2K1Q02750 393 aaPredicted RBP20.1■□□□□ 0.81
SSC4D-201ENST00000275560 VSTM1Q6UX27 236 aa20.1■□□□□ 0.81
SSC4D-201ENST00000275560 MAB21L3Q8N8X9 362 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms