RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 ZNF263O14978 683 aa13.25□□□□□ -0.29
SDE2-201ENST00000272091 POLR2FP61218 127 aaKnown RBP13.25□□□□□ -0.29
SDE2-201ENST00000272091 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
SDE2-201ENST00000272091 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
SDE2-201ENST00000272091 PLCB1Q9NQ66 1216 aa13.25□□□□□ -0.29
SDE2-201ENST00000272091 NRBP2Q9NSY0 501 aa13.25□□□□□ -0.29
SDE2-201ENST00000272091 EPN1Q9Y6I3 576 aaPredicted RBP13.25□□□□□ -0.29
SDE2-201ENST00000272091 IGKV6-21A0A0C4DH24 114 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 CNGA1P29973 690 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 FMO5P49326 533 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 SNRPFP62306 86 aaKnown RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 KLHDC7AQ5VTJ3 777 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 SYT10Q6XYQ8 523 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 ZBTB10Q96DT7 871 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 HAPLN2Q9GZV7 340 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 FLRT1Q9NZU1 646 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 TLL2Q9Y6L7 1015 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 SLC15A5A6NIM6 579 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 NOP56O00567 594 aaKnown RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 CAPSQ13938 189 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 PPP2R5AQ15172 486 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 TRAPPC12Q8WVT3 735 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 GLG1Q92896 1179 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 EMID1Q96A84 441 aaPredicted RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 AZI2Q9H6S1 392 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 ZCCHC17Q9NP64 241 aaKnown RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
SDE2-201ENST00000272091 GOLGA8IPA6NC78 632 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 GOLGA8JA6NMD2 632 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 FHOD1Q9Y613 1164 aa13.24□□□□□ -0.29
SDE2-201ENST00000272091 SMPD1P17405 629 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 EXOC3L4Q17RC7 722 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 ASTE1Q2TB18 679 aaPredicted RBP13.23□□□□□ -0.29
SDE2-201ENST00000272091 GJB7Q6PEY0 223 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 CBWD2Q8IUF1 395 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 ZNF397Q8NF99 534 aaPredicted RBP13.23□□□□□ -0.29
SDE2-201ENST00000272091 LMO3Q8TAP4 145 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 SLC7A3Q8WY07 619 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 FAM167AQ96KS9 214 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 TINF2Q9BSI4 451 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 RNPEPQ9H4A4 650 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 MAPK13O15264 365 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 NAMPTP43490 491 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 ETF1P62495 437 aaKnown RBP13.23□□□□□ -0.29
SDE2-201ENST00000272091 PPP3CAQ08209 521 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 TAF1CQ15572 869 aaPredicted RBP13.23□□□□□ -0.29
SDE2-201ENST00000272091 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 USP6NLQ92738 828 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 IFT74Q96LB3 600 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 FBXL18Q96ME1 805 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 WDR24Q96S15 920 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
SDE2-201ENST00000272091 LRRN2O75325 713 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 CTGFP29279 349 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 EXOC7Q9UPT5 735 aa13.23□□□□□ -0.29
SDE2-201ENST00000272091 LGALS2P05162 132 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 UCHL3P15374 230 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 JAM2P57087 298 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 PPTC7Q8NI37 304 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 LZTFL1Q9NQ48 299 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 TRIM10Q9UDY6 481 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 TTLL13PA6NNM8 815 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 GH1P01241 217 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 IGHA2P01877 340 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 SMARCAD1Q9H4L7 1026 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 VAMP7P51809 220 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 TERF1P54274 439 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 LAMC2Q13753 1193 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 PRPF31Q8WWY3 499 aaKnown RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 SYN2Q92777 582 aaPredicted RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 C16orf70Q9BSU1 422 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 PPME1Q9Y570 386 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 STYXL1Q9Y6J8 313 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 EVPLQ92817 2033 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 KIF3CO14782 793 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 LCA5LO95447 670 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 EIF4A3P38919 411 aaKnown RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 ACVR2BQ13705 512 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 MYRIPQ8NFW9 859 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
SDE2-201ENST00000272091 CCDC113Q9H0I3 377 aa13.22□□□□□ -0.29
SDE2-201ENST00000272091 PHLPP2Q6ZVD8 1323 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms