RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 NAP1L3Q99457 506 aaPredicted RBP18.53■□□□□ 0.56
LRRC56-201ENST00000270115 MKNK2Q9HBH9 465 aa18.53■□□□□ 0.56
LRRC56-201ENST00000270115 WDR35Q9P2L0 1181 aa18.53■□□□□ 0.56
LRRC56-201ENST00000270115 ASB3Q9Y575 518 aa18.53■□□□□ 0.56
LRRC56-201ENST00000270115 COL1A1P02452 1464 aaPredicted RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 COL22A1Q8NFW1 1626 aaPredicted RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 RNF8O76064 485 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 AFPP02771 609 aaKnown RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 BRAFP15056 766 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 GNA11P29992 359 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 RANBP1P43487 201 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 KCNJ1P48048 391 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 MECOMQ03112 1051 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 CROCCP2Q86T23 111 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 DGKHQ86XP1 1220 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 REXO1Q8N1G1 1221 aaKnown RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 DRAXINQ8NBI3 349 aaPredicted RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 B4GALNT2Q8NHY0 566 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 ANKRD27Q96NW4 1050 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 KCTD10Q9H3F6 313 aa18.52■□□□□ 0.56
LRRC56-201ENST00000270115 BMP2KQ9NSY1 1161 aaPredicted RBP18.52■□□□□ 0.56
LRRC56-201ENST00000270115 EPHB2P29323 1055 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 CNGA1P29973 690 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 MARCKSL1P49006 195 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 MARSP56192 900 aaKnown RBP18.52■□□□□ 0.55
LRRC56-201ENST00000270115 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.55
LRRC56-201ENST00000270115 CCDC137Q6PK04 289 aaKnown RBP18.52■□□□□ 0.55
LRRC56-201ENST00000270115 MTHFD1LQ6UB35 978 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 PRELID2Q8N945 189 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 TMEM109Q9BVC6 243 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 CARD9Q9H257 536 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 TXLNGQ9NUQ3 528 aa18.52■□□□□ 0.55
LRRC56-201ENST00000270115 G3BP2Q9UN86 482 aaKnown RBP18.52■□□□□ 0.55
LRRC56-201ENST00000270115 KCNQ2O43526 872 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 RARGP13631 454 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 PRKCIP41743 596 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 FXR2P51116 673 aaKnown RBP eCLIP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 DRG2P55039 364 aaKnown RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 TSNAXIP1Q2TAA8 658 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 RPUSD2Q8IZ73 545 aaKnown RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 ZDHHC14Q8IZN3 488 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 SLC44A5Q8NCS7 719 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 CTNNBL1Q8WYA6 563 aaPredicted RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 BORCS6Q96GS4 357 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 NGLY1Q96IV0 654 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 PITPNM3Q9BZ71 974 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 NENFQ9UMX5 172 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 MARCH6O60337 910 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 PHF2O75151 1096 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 TSPY3P0CV98 308 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 TSPY8P0CW00 308 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 NPEPPSP55786 919 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 CCDC105Q8IYK2 499 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 ZNF526Q8TF50 670 aaPredicted RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 KIAA1683Q9H0B3 1180 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 CDC42EP4Q9H3Q1 356 aaKnown RBP18.51■□□□□ 0.55
LRRC56-201ENST00000270115 RGL1Q9NZL6 768 aa18.51■□□□□ 0.55
LRRC56-201ENST00000270115 ARAP2Q8WZ64 1704 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 CASP5P51878 434 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 PPP2R5EQ16537 467 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 RNF43Q68DV7 783 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 MFSD5Q6N075 450 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 ASAP3Q8TDY4 903 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 RFFLQ8WZ73 363 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 KRT35Q92764 455 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 NSUN4Q96CB9 384 aaKnown RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 PIGSQ96S52 555 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 TMEM47Q9BQJ4 181 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 EP400Q96L91 3159 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 KRT18P05783 430 aaKnown RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 VCAM1P19320 739 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 PPATQ06203 517 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 LBRQ14739 615 aaKnown RBP18.5■□□□□ 0.55
LRRC56-201ENST00000270115 TMEM119Q4V9L6 283 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 SMIM5Q71RC9 77 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 CCDC65Q8IXS2 484 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 GORASP1Q9BQQ3 440 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 TBC1D10AQ9BXI6 508 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 UBA5Q9GZZ9 404 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 THAP2Q9H0W7 228 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 TAS2R14Q9NYV8 317 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 GCNT4Q9P109 453 aa18.5■□□□□ 0.55
LRRC56-201ENST00000270115 TCRBV7S2A1N4TA0A589 114 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 PALM3A6NDB9 673 aaPredicted RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 XRCC5P13010 732 aaKnown RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SKIV2L2P42285 1042 aaKnown RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 ZC3H12AQ5D1E8 599 aaKnown RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 PCDHA2Q9Y5H9 948 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 FOXN2P32314 431 aa18.49■□□□□ 0.55
LRRC56-201ENST00000270115 CTTNQ14247 550 aaKnown RBP18.49■□□□□ 0.55
LRRC56-201ENST00000270115 SETDB1Q15047 1291 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms