RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CTTNBP2NLQ9P2B4 639 aa29.7■■■□□ 2.34
CBX4-201ENST00000269397 DBR1Q9UK59 544 aaKnown RBP29.7■■■□□ 2.34
CBX4-201ENST00000269397 PTPN22Q9Y2R2 807 aa29.7■■■□□ 2.34
CBX4-201ENST00000269397 CCDC169A6NNP5 214 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 EYA4O95677 639 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 ZNF76P36508 570 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 AP3B2Q13367 1082 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 Q4G0T1 1027 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 PHLDB3Q6NSJ2 640 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 PRELID2Q8N945 189 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.69■■■□□ 2.342e-10■■■■□ 26.4
CBX4-201ENST00000269397 BAIAP2L1Q9UHR4 511 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 SLC26A4O43511 780 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 PGM2Q96G03 612 aa29.69■■■□□ 2.34
CBX4-201ENST00000269397 PTGIRP43119 386 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 ELF3P78545 371 aaPredicted RBP29.68■■■□□ 2.34
CBX4-201ENST00000269397 CDC42EP5Q6NZY7 148 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 ANKS4BQ8N8V4 417 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 OLFML3Q9NRN5 406 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 APEX2Q9UBZ4 518 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 TCRBV7S2A1N4TA0A589 114 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 FAM187AA6NFU0 413 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 DHX34Q14147 1143 aaKnown RBP29.68■■■□□ 2.34
CBX4-201ENST00000269397 MOXD1Q6UVY6 613 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 CPNE8Q86YQ8 564 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 ANKRD62A6NC57 917 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 ANKRD63C9JTQ0 380 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 DNAJC8O75937 253 aaPredicted RBP29.68■■■□□ 2.34
CBX4-201ENST00000269397 ELF1P32519 619 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 FAM196AQ6ZSG2 479 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 CCDC25Q86WR0 208 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 TCP11Q8WWU5 503 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 DIS3Q9Y2L1 958 aaKnown RBP29.68■■■□□ 2.34
CBX4-201ENST00000269397 CD2APQ9Y5K6 639 aa29.68■■■□□ 2.34
CBX4-201ENST00000269397 FOCADQ5VW36 1801 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 HLA-DOAP06340 250 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 HOOK2Q96ED9 719 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 RASAL2Q9UJF2 1139 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 TBX3O15119 743 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 ATMINO43313 823 aaPredicted RBP29.67■■■□□ 2.34
CBX4-201ENST00000269397 AMNQ9BXJ7 453 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 TRPC6Q9Y210 931 aa29.67■■■□□ 2.34
CBX4-201ENST00000269397 PHF2O75151 1096 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 FTLP02792 175 aaPredicted RBP29.66■■■□□ 2.34
CBX4-201ENST00000269397 GHRP10912 638 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 KCNJ1P48048 391 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 MYL7Q01449 175 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 MESDQ14696 234 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 LRRC14Q15048 493 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 DYDC2Q96IM9 177 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 FAM20AQ96MK3 541 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 MGRN1O60291 552 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 CLTAP09496 248 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 SREBF1P36956 1147 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 FRMPD4Q14CM0 1322 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 NBPF9Q3BBW0 867 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 SPDYCQ5MJ68 293 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 CCDC137Q6PK04 289 aaKnown RBP29.66■■■□□ 2.34
CBX4-201ENST00000269397 TBC1D1Q86TI0 1168 aaPredicted RBP29.66■■■□□ 2.34
CBX4-201ENST00000269397 PNMA8AQ86V59 439 aaPredicted RBP29.66■■■□□ 2.34
CBX4-201ENST00000269397 MGARPQ8TDB4 240 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 FRMD4BQ9Y2L6 1034 aa29.66■■■□□ 2.34
CBX4-201ENST00000269397 OTUD6AQ7L8S5 288 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 PIGWQ7Z7B1 504 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 BANK1Q8NDB2 785 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 P3H4Q92791 437 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 SAMD15Q9P1V8 674 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 PCDHAC2Q9Y5I4 1007 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 DOK7Q18PE1 504 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 FBXO11Q86XK2 927 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 CCDC50Q8IVM0 306 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 RBM17Q96I25 401 aaKnown RBP29.65■■■□□ 2.34
CBX4-201ENST00000269397 AGPAT1Q99943 283 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 PARVGQ9HBI0 331 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 AGPAT3Q9NRZ7 376 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 ABCF3Q9NUQ8 709 aa29.65■■■□□ 2.34
CBX4-201ENST00000269397 ATP6V1G2O95670 118 aa29.64■■■□□ 2.34
CBX4-201ENST00000269397 RPSAP08865 295 aaKnown RBP29.64■■■□□ 2.34
CBX4-201ENST00000269397 PPP2R5EQ16537 467 aa29.64■■■□□ 2.34
CBX4-201ENST00000269397 C1orf186Q6ZWK4 172 aa29.64■■■□□ 2.34
CBX4-201ENST00000269397 BTBD6Q96KE9 485 aa29.64■■■□□ 2.34
CBX4-201ENST00000269397 NOD2Q9HC29 1040 aa29.64■■■□□ 2.34
CBX4-201ENST00000269397 UBE2TQ9NPD8 197 aaPredicted RBP29.64■■■□□ 2.34
CBX4-201ENST00000269397 EZRP15311 586 aaKnown RBP29.64■■■□□ 2.33
CBX4-201ENST00000269397 GAP43P17677 238 aa29.64■■■□□ 2.33
CBX4-201ENST00000269397 UBXN2AP68543 259 aa29.64■■■□□ 2.33
CBX4-201ENST00000269397 DLG4P78352 724 aa29.64■■■□□ 2.33
CBX4-201ENST00000269397 HS2ST1Q7LGA3 356 aa29.64■■■□□ 2.33
CBX4-201ENST00000269397 SMCHD1A6NHR9 2005 aa29.64■■■□□ 2.33
CBX4-201ENST00000269397 FOXO6A8MYZ6 492 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 ASAP2O43150 1006 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 ECM2O94769 699 aaPredicted RBP29.63■■■□□ 2.33
CBX4-201ENST00000269397 SLITRK3O94933 977 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 CRY2Q49AN0 593 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 FAM178BQ8IXR5 827 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 CCDC63Q8NA47 563 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 POP1Q99575 1024 aaKnown RBP29.63■■■□□ 2.33
CBX4-201ENST00000269397 POLR3CQ9BUI4 534 aaPredicted RBP29.63■■■□□ 2.33
CBX4-201ENST00000269397 ZNF831Q5JPB2 1677 aa29.63■■■□□ 2.33
CBX4-201ENST00000269397 EXOC3O60645 756 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms