RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 MAPK13O15264 365 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 C22orf31O95567 290 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 SKILP12757 684 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 CYP2J2P51589 502 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 CAPSQ13938 189 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 CNGA4Q8IV77 575 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 KIAA1524Q8TCG1 905 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 TRAPPC12Q8WVT3 735 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 PANX2Q96RD6 677 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 PYCARDQ9ULZ3 195 aa15.44■□□□□ 0.06
SS18-201ENST00000269137 LRRIQ4A6NIV6 560 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 ASAP2O43150 1006 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 ADCY3O60266 1144 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 EXOC3O60645 756 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 MFAP3LO75121 409 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 PIGRP01833 764 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 AKR1A1P14550 325 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 ADSSP30520 456 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 VEGFBP49765 207 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 EFNA5P52803 228 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 MCCD1P59942 119 aaPredicted RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 PRKCZQ05513 592 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 LAMTOR4Q0VGL1 99 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 KCNH2Q12809 1159 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 LINC01465Q8N7H1 131 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 XXYLT1Q8NBI6 393 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 TRIB2Q92519 343 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 CBWD1Q9BRT8 395 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 TTYH3Q9C0H2 523 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 AP5M1Q9H0R1 490 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 HSPBP1Q9NZL4 362 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 SUCLA2Q9P2R7 463 aaPredicted RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 KAT6AQ92794 2004 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 SIP14410 1827 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 EVPLQ92817 2033 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 TISP43B9A030 160 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 ANKRD63C9JTQ0 380 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 K7ERI5 159 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 ZNF500O60304 480 aaPredicted RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 DUSP11O75319 330 aaKnown RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 TRPA1O75762 1119 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 F2P00734 622 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 AFPP02771 609 aaKnown RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 CYBAP13498 195 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 CASP14P31944 242 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 CPT1AP50416 773 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 FXR1P51114 621 aaKnown RBP eCLIP15.43■□□□□ 0.06
SS18-201ENST00000269137 ADKP55263 362 aaKnown RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 STRN3Q13033 797 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 CDCA2Q69YH5 1023 aaPredicted RBP15.43■□□□□ 0.06
SS18-201ENST00000269137 EFCAB12Q6NXP0 572 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 LRRC71Q8N4P6 559 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 TRPV1Q8NER1 839 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 SLC35C1Q96A29 364 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 CAPN11Q9UMQ6 739 aa15.43■□□□□ 0.06
SS18-201ENST00000269137 GARTP22102 1010 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 KLRC1P26715 233 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 CAP1Q01518 475 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 GOLGA8FQ08AF8 430 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 GOLGA8DPQ0D2H9 430 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 PPFIA1Q13136 1202 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 SLC39A4Q6P5W5 647 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 CPLX3Q8WVH0 158 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 STYXL1Q9Y6J8 313 aa15.42■□□□□ 0.06
SS18-201ENST00000269137 A0A1W2PQJ5 194 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 TTC26A0AVF1 554 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 RRN3P2A6NIE6 340 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 HNRNPDLO14979 420 aaKnown RBP15.41■□□□□ 0.06
SS18-201ENST00000269137 STX10O60499 249 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 TRIM21P19474 475 aaKnown RBP15.41■□□□□ 0.06
SS18-201ENST00000269137 FECHP22830 423 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 HOXD10P28358 340 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 KCNJ6P48051 423 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 POU5F1BQ06416 359 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 TFDP1Q14186 410 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 INTS8Q75QN2 995 aaKnown RBP15.41■□□□□ 0.06
SS18-201ENST00000269137 TMEM139Q8IV31 216 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 KAT2BQ92831 832 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 LENG1Q96BZ8 264 aaPredicted RBP15.41■□□□□ 0.06
SS18-201ENST00000269137 FBXL18Q96ME1 805 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 EDEM3Q9BZQ6 932 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 C2orf40Q9H1Z8 148 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
SS18-201ENST00000269137 LUC7L2Q9Y383 392 aaKnown RBP15.41■□□□□ 0.06
SS18-201ENST00000269137 GTPBP10A4D1E9 387 aaKnown RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 RNF225M0QZC1 329 aaPredicted RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 KLK7P49862 253 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 IGBP1P78318 339 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 KCNMA1Q12791 1236 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 GRIK4Q16099 956 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 MTHFD1LQ6UB35 978 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 ZBTB8OSQ8IWT0 167 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 METTL13Q8N6R0 699 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 RNF149Q8NC42 400 aa15.4■□□□□ 0.06
SS18-201ENST00000269137 PCMTD1Q96MG8 357 aaPredicted RBP15.4■□□□□ 0.06
SS18-201ENST00000269137 BAG1Q99933 345 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms