RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 MFAP3P55082 362 aa21.35■■□□□ 1.01
CSPG5-201ENST00000264723 HIBCHQ6NVY1 386 aaPredicted RBP21.35■■□□□ 1.01
CSPG5-201ENST00000264723 LRRC55Q6ZSA7 311 aa21.35■■□□□ 1.01
CSPG5-201ENST00000264723 FRMD5Q7Z6J6 570 aa21.35■■□□□ 1.01
CSPG5-201ENST00000264723 NLRP4Q96MN2 994 aa21.35■■□□□ 1.01
CSPG5-201ENST00000264723 CHD2O14647 1828 aaKnown RBP21.35■■□□□ 1.01
CSPG5-201ENST00000264723 WDR64B1ANS9 1081 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 NSFP46459 744 aaKnown RBP21.34■■□□□ 1.01
CSPG5-201ENST00000264723 NPEPPSP55786 919 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 ICE2Q659A1 982 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 XXYLT1Q8NBI6 393 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 MSH4O15457 936 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 STX2P32856 288 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 SGO2Q562F6 1265 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 C10orf76Q5T2E6 689 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 PASD1Q8IV76 773 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 PDXKO00764 312 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 SOX5P35711 763 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 HSD17B3P37058 310 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 MDH1P40925 334 aaKnown RBP21.34■■□□□ 1.01
CSPG5-201ENST00000264723 CORO7P57737 925 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 GIT2Q14161 759 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 C1orf54Q8WWF1 131 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 FAM213AQ9BRX8 229 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 GMNCA6NCL1 334 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 POC1B-GALNT4F8VUJ3 575 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 CCDC188H7C350 402 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 C2CD6Q53TS8 623 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 PLA2G4FQ68DD2 849 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 BAP1Q92560 729 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 PNMA2Q9UL42 364 aa21.34■■□□□ 1.01
CSPG5-201ENST00000264723 CCDC91Q7Z6B0 441 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 THNSL1Q8IYQ7 743 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 ZNF473Q8WTR7 871 aaKnown RBP21.33■■□□□ 1.01
CSPG5-201ENST00000264723 VPS37BQ9H9H4 285 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 ATP2A1O14983 1001 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 MAPK4P31152 587 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 HOXA10P31260 410 aaPredicted RBP21.33■■□□□ 1.01
CSPG5-201ENST00000264723 CDAN1Q8IWY9 1227 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 OTUD5Q96G74 571 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 APOL6Q9BWW8 343 aa21.33■■□□□ 1.01
CSPG5-201ENST00000264723 SMARCA1P28370 1054 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 MAP2K2P36507 400 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 SEMA3FQ13275 785 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 STYK1Q6J9G0 422 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 HAUS6Q7Z4H7 955 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 BTBD6Q96KE9 485 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 BCAS3Q9H6U6 928 aa21.33■■□□□ 1
CSPG5-201ENST00000264723 CYP26A1O43174 497 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 MMEP08473 750 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 RPA1P27694 616 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 MIS18BP1Q6P0N0 1132 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 SCARA5Q6ZMJ2 495 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 TAOK1Q7L7X3 1001 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 AENQ8WTP8 325 aaKnown RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 DEFB129Q9H1M3 183 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 RASGRF2O14827 1237 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 GAS8O95995 478 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 PSAPP07602 524 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 FMO5P49326 533 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 ANGEL2Q5VTE6 544 aaKnown RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 VSIG1Q86XK7 387 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 MAK16Q9BXY0 300 aaKnown RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 THAP2Q9H0W7 228 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 PLCB1Q9NQ66 1216 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 ZBTB16Q05516 673 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 TBC1D1Q86TI0 1168 aaPredicted RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 CCDC197Q8NCU1 140 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 NSUN6Q8TEA1 469 aaKnown RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 ZKSCAN4Q969J2 545 aaPredicted RBP21.32■■□□□ 1
CSPG5-201ENST00000264723 HAUS1Q96CS2 278 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 DNAJC19Q96DA6 116 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 MYH2Q9UKX2 1941 aa21.32■■□□□ 1
CSPG5-201ENST00000264723 PPP2R2AP63151 447 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 CDK17Q00537 523 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 MMS22LQ6ZRQ5 1243 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 TPCN2Q8NHX9 752 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 DNAI2Q9GZS0 605 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 FAM86B1E9PN63 330 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 GOLGA8SH3BPF8 625 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 FAM86B2P0C5J1 330 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 GMPSP49915 693 aaPredicted RBP21.31■■□□□ 1
CSPG5-201ENST00000264723 EPHA7Q15375 998 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 FAM163AQ96GL9 167 aaPredicted RBP21.31■■□□□ 1
CSPG5-201ENST00000264723 EDRF1Q3B7T1 1238 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 Q3C1V9 767 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 TTMPQ5BVD1 217 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 RFFLQ8WZ73 363 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 PSMD1Q99460 953 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 MYOZ2Q9NPC6 264 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 TBC1D22BQ9NU19 505 aa21.31■■□□□ 1
CSPG5-201ENST00000264723 ATG4CQ96DT6 458 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 CDHR1Q96JP9 859 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 DBR1Q9UK59 544 aaKnown RBP21.3■■□□□ 1
CSPG5-201ENST00000264723 ZNF148Q9UQR1 794 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 PASKQ96RG2 1323 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 FOXN3O00409 490 aaPredicted RBP21.3■■□□□ 1
CSPG5-201ENST00000264723 TLR2O60603 784 aa21.3■■□□□ 1
CSPG5-201ENST00000264723 ARP10275 920 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms