RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PUS10Q3MIT2 529 aaKnown RBP17.9■□□□□ 0.46
USE1-201ENST00000263897 KCNT2Q6UVM3 1135 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 LRRC43Q8N309 656 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 PPP2R3CQ969Q6 453 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 IGFLR1Q9H665 355 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 AGPAT5Q9NUQ2 364 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 FAM105AQ9NUU6 356 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 KIF3AQ9Y496 699 aa17.9■□□□□ 0.46
USE1-201ENST00000263897 GRXCR2A6NFK2 248 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 MED24O75448 989 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 CD2BP2O95400 341 aaKnown RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 RPA1P27694 616 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 HOXA11P31270 313 aaPredicted RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 ARL2P36404 184 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 TOB1P50616 345 aaPredicted RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 RAB27AP51159 221 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 PTENP60484 403 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 ERVFC1P60507 584 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 PLCB3Q01970 1234 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 PTCRAQ6ISU1 281 aaPredicted RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 ERMNQ8TAM6 284 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 MICAL1Q8TDZ2 1067 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 TBC1D32Q96NH3 1257 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 NACC1Q96RE7 527 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 DBR1Q9UK59 544 aaKnown RBP17.89■□□□□ 0.45
USE1-201ENST00000263897 LZTS1Q9Y250 596 aa17.89■□□□□ 0.45
USE1-201ENST00000263897 MCM2P49736 904 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 TFDP1Q14186 410 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 NBR1Q14596 966 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 PCBP1Q15365 356 aaKnown RBP eCLIP17.88■□□□□ 0.45
USE1-201ENST00000263897 LONRF3Q496Y0 759 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 PDE12Q6L8Q7 609 aaKnown RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 MRPL10Q7Z7H8 261 aaKnown RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 ADGRD2Q7Z7M1 963 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 IFNLR1Q8IU57 520 aaPredicted RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 ASAP3Q8TDY4 903 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 RSPH1Q8WYR4 309 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 MRPS27Q92552 414 aaKnown RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 LPPQ93052 612 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 PGBD4Q96DM1 585 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 MRPL9Q9BYD2 267 aaKnown RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 TLR9Q9NR96 1032 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 SPG21Q9NZD8 308 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 PUF60Q9UHX1 559 aaKnown RBP17.88■□□□□ 0.45
USE1-201ENST00000263897 PCDHB2Q9Y5E7 798 aa17.88■□□□□ 0.45
USE1-201ENST00000263897 XIRP2A4UGR9 3374 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 MEIS3P2A8K0S8 358 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 LINC01565O15544 149 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 OFD1O75665 1012 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 GLRA2P23416 452 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 PPM1AP35813 382 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
USE1-201ENST00000263897 KRT17Q04695 432 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 DLX2Q07687 328 aaPredicted RBP17.87■□□□□ 0.45
USE1-201ENST00000263897 PTGDRQ13258 359 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 PDIA5Q14554 519 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 UBXN11Q5T124 520 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 RBM23Q86U06 439 aaKnown RBP17.87■□□□□ 0.45
USE1-201ENST00000263897 FAM178BQ8IXR5 827 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 EFHBQ8N7U6 833 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 PCDHB6Q9Y5E3 794 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 PCDHGC5Q9Y5F6 944 aa17.87■□□□□ 0.45
USE1-201ENST00000263897 FSCN2O14926 492 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 USO1O60763 962 aaKnown RBP17.86■□□□□ 0.45
USE1-201ENST00000263897 ERLIN2O94905 339 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 IL9P15248 144 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 MUTP22033 750 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 AXLP30530 894 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 PBX3P40426 434 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 NRIP1P48552 1158 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
USE1-201ENST00000263897 NCBP1Q09161 790 aaKnown RBP17.86■□□□□ 0.45
USE1-201ENST00000263897 CAPSQ13938 189 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 NOMO2Q5JPE7 1267 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 GLB1LQ6UWU2 654 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 NFKBIZQ9BYH8 718 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 POLR3FQ9H1D9 316 aaPredicted RBP17.86■□□□□ 0.45
USE1-201ENST00000263897 TLE6Q9H808 572 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 LRWD1Q9UFC0 647 aa17.86■□□□□ 0.45
USE1-201ENST00000263897 INO80B-WBP1J3KQ70 363 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 TSPAN1O60635 241 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 GJB2P29033 226 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 BCAR1P56945 870 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 MCTP1Q6DN14 999 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 POTEGQ6S5H5 508 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 AGMOQ6ZNB7 445 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 SLC39A11Q8N1S5 342 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 CNNM3Q8NE01 707 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 MCPH1Q8NEM0 835 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 CD320Q9NPF0 282 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 TBC1D13Q9NVG8 400 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 FAM50BQ9Y247 325 aa17.85■□□□□ 0.45
USE1-201ENST00000263897 LAD1O00515 517 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 PER2O15055 1255 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 TBX10O75333 385 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 CYP11B2P19099 503 aa17.84■□□□□ 0.45
USE1-201ENST00000263897 CCT6AP40227 531 aaKnown RBP17.84■□□□□ 0.45
USE1-201ENST00000263897 MBTD1Q05BQ5 628 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms