RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 C3orf20Q8ND61 904 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 ATXN2LQ8WWM7 1075 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 BORCS6Q96GS4 357 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 BTBD6Q96KE9 485 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 POP1Q99575 1024 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 STK33Q9BYT3 514 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 INTS2Q9H0H0 1204 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 CNOT10Q9H9A5 744 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 ACP6Q9NPH0 428 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 PLIN4Q96Q06 1357 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 EIF3BP55884 814 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 MAPK7Q13164 816 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 DOK7Q18PE1 504 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 HOOK2Q96ED9 719 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 DNAJC17Q9NVM6 304 aaKnown RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.41■□□□□ 0.76e-10■□□□□ 8.2
TRAF4-201ENST00000262395 INTUQ9ULD6 942 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 ELF1P32519 619 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 ACCSLQ4AC99 568 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 LACTB2Q53H82 288 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 PHLDB3Q6NSJ2 640 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 SAMD1Q6SPF0 538 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-201ENST00000262395 ABCF3Q9NUQ8 709 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 GRHL1Q9NZI5 618 aa19.41■□□□□ 0.7
TRAF4-201ENST00000262395 CYP3A7-CYP3A51PA0A087WV96 503 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 SLC16A3O15427 465 aaKnown RBP19.4■□□□□ 0.7
TRAF4-201ENST00000262395 VCAM1P19320 739 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 CYP3A7P24462 503 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 XRCC4Q13426 336 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 PRELID2Q8N945 189 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 NAP1L4Q99733 375 aaKnown RBP19.4■□□□□ 0.7
TRAF4-201ENST00000262395 CARD9Q9H257 536 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 PCIF1Q9H4Z3 704 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 TISP43B9A030 160 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 PPIP5K2O43314 1243 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 CREB1P16220 341 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 TBC1D10BQ4KMP7 808 aaPredicted RBP19.4■□□□□ 0.7
TRAF4-201ENST00000262395 TRAPPC3LQ5T215 181 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 TRMT1LQ7Z2T5 733 aaKnown RBP19.4■□□□□ 0.7
TRAF4-201ENST00000262395 DYDC2Q96IM9 177 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 NCANO14594 1321 aa19.4■□□□□ 0.7
TRAF4-201ENST00000262395 FTLP02792 175 aaPredicted RBP19.39■□□□□ 0.7
TRAF4-201ENST00000262395 MMP13P45452 471 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 ADCY1Q08828 1119 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 FAM196AQ6ZSG2 479 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 ANKS4BQ8N8V4 417 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 ELMO3Q96BJ8 720 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 KDM4CQ9H3R0 1056 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 DNAJC18Q9H819 358 aa19.39■□□□□ 0.7
TRAF4-201ENST00000262395 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
TRAF4-201ENST00000262395 DLG4P78352 724 aa19.39■□□□□ 0.69
TRAF4-201ENST00000262395 CDC42EP5Q6NZY7 148 aa19.39■□□□□ 0.69
TRAF4-201ENST00000262395 TBC1D22AQ8WUA7 517 aa19.39■□□□□ 0.69
TRAF4-201ENST00000262395 TTC7AQ9ULT0 858 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-201ENST00000262395 L3MBTL1Q9Y468 752 aa19.39■□□□□ 0.69
TRAF4-201ENST00000262395 GDF11O95390 407 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 PTGIRP43119 386 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 LONRF1Q17RB8 773 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 WLSQ5T9L3 541 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 CCDC137Q6PK04 289 aaKnown RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 ARMC9Q7Z3E5 817 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 CCDC63Q8NA47 563 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 NOD2Q9HC29 1040 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 UBE2TQ9NPD8 197 aaPredicted RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 SAMD15Q9P1V8 674 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 VAV3Q9UKW4 847 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 AGAP1Q9UPQ3 857 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 ATP6V1G2O95670 118 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 EZRP15311 586 aaKnown RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 MYL7Q01449 175 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 BARGINQ6ZT62 677 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 CCDC105Q8IYK2 499 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 SPICE1Q8N0Z3 855 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 KAT5Q92993 513 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 MBOAT7Q96N66 472 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 DDX23Q9BUQ8 820 aaKnown RBP19.38■□□□□ 0.69
TRAF4-201ENST00000262395 APEX2Q9UBZ4 518 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 TRPC6Q9Y210 931 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 EYA4O95677 639 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 NUDT17P0C025 328 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 BMT2Q1RMZ1 405 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 SYT11Q9BT88 431 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 RASAL2Q9UJF2 1139 aa19.38■□□□□ 0.69
TRAF4-201ENST00000262395 ACSL3O95573 720 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 PYGMP11217 842 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 COMTP21964 271 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 DYDC1Q8WWB3 177 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 CRYGNQ8WXF5 182 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 NAP1L3Q99457 506 aaPredicted RBP19.37■□□□□ 0.69
TRAF4-201ENST00000262395 FRMD4BQ9Y2L6 1034 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 STRCQ7RTU9 1775 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 ANKRD62A6NC57 917 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 MGRN1O60291 552 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 EXOC3O60645 756 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 HLA-DOAP06340 250 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 ARHGEF19Q8IW93 802 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 SYCP3Q8IZU3 236 aa19.37■□□□□ 0.69
TRAF4-201ENST00000262395 ANKRD42Q8N9B4 389 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms