RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 AKT3Q9Y243 479 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 TCHHQ07283 1943 aa12.84□□□□□ -0.35
PFDN1-201ENST00000261813 A0A087X0B3 334 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
PFDN1-201ENST00000261813 CXCL10P02778 98 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 SYKP43405 635 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 GPC3P51654 580 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 LPIN1Q14693 890 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 KIZQ2M2Z5 673 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 TCTN1Q2MV58 587 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 IER5Q5VY09 327 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 RASSF8Q8NHQ8 419 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 GPT2Q8TD30 523 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 ZNF668Q96K58 619 aaPredicted RBP12.83□□□□□ -0.36
PFDN1-201ENST00000261813 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.36
PFDN1-201ENST00000261813 KCNH3Q9ULD8 1083 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 EVPLQ92817 2033 aa12.83□□□□□ -0.36
PFDN1-201ENST00000261813 M0QZ92 97 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
PFDN1-201ENST00000261813 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 GHRP10912 638 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 PFKFB1P16118 471 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 CYP11B2P19099 503 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 ARL2P36404 184 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 DNM2P50570 870 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 SLC12A3P55017 1021 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
PFDN1-201ENST00000261813 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 TMEM240Q5SV17 173 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 RINT1Q6NUQ1 792 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 ZNF365Q70YC5 407 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-201ENST00000261813 SYT2Q8N9I0 419 aaPredicted RBP12.82□□□□□ -0.36
PFDN1-201ENST00000261813 IQUBQ8NA54 791 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 TMEM40Q8WWA1 233 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 RAD54LQ92698 747 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 OSMRQ99650 979 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFDN1-201ENST00000261813 RUSC1Q9BVN2 902 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 GPRC5CQ9NQ84 441 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 GINS2Q9Y248 185 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 HPSEQ9Y251 543 aa12.82□□□□□ -0.36
PFDN1-201ENST00000261813 A0A1B0GVL5 298 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 SSBP05455 408 aaKnown RBP eCLIP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PFKMP08237 780 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 CRYBB1P53674 252 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PTPN5P54829 565 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 MCM6Q14566 821 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PLEKHG4Q58EX7 1191 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 C9orf50Q5SZB4 431 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PSRC1Q6PGN9 363 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 C1orf186Q6ZWK4 172 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 RPUSD2Q8IZ73 545 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 FMR1NBQ8N0W7 255 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 MCPH1Q8NEM0 835 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 ENGASEQ8NFI3 743 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 ASAP3Q8TDY4 903 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 TCP11Q8WWU5 503 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PRPF31Q8WWY3 499 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PSPC1Q8WXF1 523 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PANK2Q9BZ23 570 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 CUEDC2Q9H467 287 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 AGO3Q9H9G7 860 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 DACT1Q9NYF0 836 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 COL4A3BPQ9Y5P4 624 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 A0A087WZ62 844 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 ZNF202O95125 648 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 LIG1P18858 919 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 FECHP22830 423 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 GLRA2P23416 452 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 NDUFA8P51970 172 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 LAMTOR4Q0VGL1 99 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 SHHQ15465 462 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 TPRNQ4KMQ1 711 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 FAM102BQ5T8I3 360 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 RRAGBQ5VZM2 374 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 TSHZ1Q6ZSZ6 1077 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 PDILTQ8N807 584 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 DBF4BQ8NFT6 615 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 LARP4BQ92615 738 aaKnown RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
PFDN1-201ENST00000261813 NUP62CLQ9H1M0 184 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 MAGEF1Q9HAY2 307 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 POLD4Q9HCU8 107 aa12.81□□□□□ -0.36
PFDN1-201ENST00000261813 NOC2LQ9Y3T9 749 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms