RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PRMT7Q9NVM4 692 aaPredicted RBP20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 PCDHA11Q9Y5I1 949 aa20.71■□□□□ 0.91
CYSTM1-201ENST00000261811 RANBP2P49792 3224 aaKnown RBP20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 POLR2DO15514 142 aaKnown RBP20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 TLL1O43897 1013 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 CSDE1O75534 798 aaKnown RBP20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 FAM13AO94988 1023 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 UPP2O95045 317 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 FGFR4P22455 802 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 ABCD1P33897 745 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 SARSP49591 514 aaKnown RBP20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 PEX3P56589 373 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 DEFB103AP81534 67 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 MAPK6Q16659 721 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 TWF2Q6IBS0 349 aaKnown RBP20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 CEP57L1Q8IYX8 460 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 DHX58Q96C10 678 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 PRIMPOLQ96LW4 560 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 TMX1Q9H3N1 280 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 KMT5AQ9NQR1 393 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 AGPAT5Q9NUQ2 364 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 USP25Q9UHP3 1055 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 KCNH3Q9ULD8 1083 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 INSL6Q9Y581 213 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 PCDHB7Q9Y5E2 793 aa20.7■□□□□ 0.9
CYSTM1-201ENST00000261811 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 A0A1W2PQ27 194 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 A0A1W2PQ64 194 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 A0A1W2PQD8 194 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 GJB5O95377 273 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 PLS3P13797 630 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 RAB27AP51159 221 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 TMEM132AQ24JP5 1023 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 CDCA2Q69YH5 1023 aaPredicted RBP20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 GPR153Q6NV75 609 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 NPAS4Q8IUM7 802 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 CCDC34Q96HJ3 373 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 RAD9AQ99638 391 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 REEP2Q9BRK0 252 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 TNMDQ9H2S6 317 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 ZHX3Q9H4I2 956 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 PARVGQ9HBI0 331 aa20.69■□□□□ 0.9
CYSTM1-201ENST00000261811 FNDC1Q4ZHG4 1894 aaPredicted RBP20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 NLRC5Q86WI3 1866 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 K7ERI5 159 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 MBTD1Q05BQ5 628 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 GIT2Q14161 759 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 NAALADL2Q58DX5 795 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 ARSHQ5FYA8 562 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 NOTUMQ6P988 496 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 MYCT1Q8N699 235 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 SPIRE2Q8WWL2 714 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 CCDC51Q96ER9 411 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 MINDY3Q9H8M7 445 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
CYSTM1-201ENST00000261811 GRXCR1A8MXD5 290 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 HOXA2O43364 376 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 NPTX2P47972 431 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 STRN3Q13033 797 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 MAPK7Q13164 816 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 DSC3Q14574 896 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 FAM187BQ17R55 369 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 FAM117BQ6P1L5 589 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 APBB1IPQ7Z5R6 666 aaPredicted RBP20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 RTN4RL1Q86UN2 441 aaPredicted RBP20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 BSNDQ8WZ55 320 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 DDX12PQ92771 950 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 CHAMP1Q96JM3 812 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 YME1L1Q96TA2 773 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 NTPCRQ9BSD7 190 aaKnown RBP20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 PBX4Q9BYU1 374 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 ELAC1Q9H777 363 aaKnown RBP20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 SLC28A3Q9HAS3 691 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 GDPD2Q9HCC8 539 aa20.67■□□□□ 0.9
CYSTM1-201ENST00000261811 RALGAPA2Q2PPJ7 1873 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 TMEM265A0A087WTH1 108 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 A0A087X0B3 334 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 NPHP3-ACAD11A0A0J9YXS1 232 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 SFI1A8K8P3 1242 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 C9IYK1 514 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 EOMESO95936 686 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 PRKCBP05771 671 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 GAP43P17677 238 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 DNAJB2P25686 324 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 PRPF4BQ13523 1007 aaKnown RBP20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 E2F4Q16254 413 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 DYMQ7RTS9 669 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 HACE1Q8IYU2 909 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 DAW1Q8N136 415 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 CNNM3Q8NE01 707 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 LRRC15Q8TF66 581 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 LINC01599Q8WXQ3 324 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 PGBD4Q96DM1 585 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 TRIM6Q9C030 488 aaPredicted RBP20.66■□□□□ 0.9
CYSTM1-201ENST00000261811 FZD8Q9H461 694 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms