RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 NCAPHQ15003 741 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 CCNI2Q6ZMN8 369 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 PNMA1Q8ND90 353 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 B4GALNT2Q8NHY0 566 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 ERP27Q96DN0 273 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 PCDHB6Q9Y5E3 794 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 PEG3Q9GZU2 1588 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 TRIP10Q15642 601 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 ANGPTL8Q6UXH0 198 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 GALNT4Q8N4A0 578 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 CDC26Q8NHZ8 85 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 EME1Q96AY2 570 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 RNF26Q9BY78 433 aaPredicted RBP11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 VPS11Q9H270 941 aa11.43□□□□□ -0.58
SLC6A4-201ENST00000261707 ZNF185O15231 689 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PYGLP06737 847 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 GOLGA8HP0CJ92 632 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 HOXA7P31268 230 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 MLH1P40692 756 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 RAB14P61106 215 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PRKCQQ04759 706 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 CERKLQ49MI3 558 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 EXOC8Q8IYI6 725 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 OMA1Q96E52 524 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 KLRF2D3W0D1 207 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 SKAP2O75563 359 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 CYP21A2P08686 494 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ARL4AP40617 200 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 CYP4A11Q02928 519 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 INPP5AQ14642 412 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 E4F1Q66K89 784 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 MFSD1Q9H3U5 465 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ZWILCHQ9H900 591 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 UBAP1Q9NZ09 502 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 KIAA0232Q92628 1395 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 VCPP55072 806 aaKnown RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 TUBGCP3Q96CW5 907 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 MKL2Q9ULH7 1088 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ZNF211Q13398 564 aaPredicted RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 SIX6OS1Q8N1H7 587 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ACCSQ96QU6 501 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 HEMGNQ9BXL5 484 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 NDEL1Q9GZM8 345 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PCIF1Q9H4Z3 704 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 SLC38A10Q9HBR0 1119 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 M0R3G1 203 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PRPSAP2O60256 369 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ATP6V1B1P15313 513 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 SEC24CP53992 1094 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 MAPRE2Q15555 327 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 TMC5Q6UXY8 1006 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 HSPH1Q92598 858 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 DHX38Q92620 1227 aaKnown RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 PRPF18Q99633 342 aaKnown RBP11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 SLC13A1Q9BZW2 595 aa11.42□□□□□ -0.58
SLC6A4-201ENST00000261707 ZNF189O75820 626 aaPredicted RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 NNMTP40261 264 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 ZNF157P51786 506 aaPredicted RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 NR5A1Q13285 461 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 DHX34Q14147 1143 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 ZBED8Q8IZ13 594 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 NDUFAF2Q8N183 169 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 LZICQ8WZA0 190 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 USP17L12C9JPN9 530 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 USP17L21D6R901 530 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 E7ENQ6 273 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 POLR2MP0CAP2 368 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 ZNF589Q86UQ0 364 aaPredicted RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 ALG13Q9NP73 1137 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 SYBUQ9NX95 663 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 NDUFA13Q9P0J0 144 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 AKAP10O43572 662 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 PLCG1P19174 1290 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 PDIA2Q13087 525 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 TBCCQ15814 346 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 CCDC137Q6PK04 289 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 RASGRP4Q8TDF6 673 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 THTPAQ9BU02 230 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 THRAP3Q9Y2W1 955 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 NQO1P15559 274 aaKnown RBP11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 RNPEPQ9H4A4 650 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 ATP6V0A4Q9HBG4 840 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 SYCP2Q9BX26 1530 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 FAM200BP0CF97 657 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 FAM182BQ5T319 152 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 DEPDC1Q5TB30 811 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 PPM1NQ8N819 430 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 TTLL6Q8N841 843 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 DDI1Q8WTU0 396 aa11.41□□□□□ -0.58
SLC6A4-201ENST00000261707 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms